RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 STK36Q9NRP7 1315 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 IGKV6D-41A0A0C4DH26 115 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 CCDC196A0A1B0GTZ2 297 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ASB14A6NK59 587 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 KIF28PB7ZC32 967 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 DCXO43602 365 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 BRD1O95696 1058 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 SUPT20HL2P0C7V6 817 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 TOP1P11387 765 aaKnown RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 SYT1P21579 422 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ERVK-21P61565 698 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 PURAQ00577 322 aaKnown RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 TCTN1Q2MV58 587 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 IQSEC1Q6DN90 963 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 EEPD1Q7L9B9 569 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 RASGRP2Q7LDG7 609 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 DGKHQ86XP1 1220 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 LRRC47Q8N1G4 583 aaKnown RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 PLPP7Q8NBV4 271 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 CTCFLQ8NI51 663 aaPredicted RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 PPP1R13LQ8WUF5 828 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 BAP1Q92560 729 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 PHKBQ93100 1093 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 TANC1Q9C0D5 1861 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ACAD9Q9H845 621 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 TCP11L1Q9NUJ3 509 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 RBM28Q9NW13 759 aaKnown RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 NYAP2Q9P242 653 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ORC3Q9UBD5 711 aaPredicted RBP7.31□□□□□ -1.24
HDAC1-205ENST00000472928 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 CACNA1GO43497 2377 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 MYH7BA7E2Y1 1941 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 LCTP09848 1927 aa7.31□□□□□ -1.24
HDAC1-205ENST00000472928 TRIP12Q14669 1992 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 LINC01553A4QN01 128 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 H3BQV1 296 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 BAIAP3O94812 1187 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 PLEKHA8P1O95397 391 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 TTLL1O95922 423 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 F13A1P00488 732 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 ZSCAN22P10073 491 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 IFNAR1P17181 557 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 KIF5BP33176 963 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 WDR5P61964 334 aaKnown RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 DEFB103AP81534 67 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 SSRP1Q08945 709 aaKnown RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 TROAPQ12815 778 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 NCOA4Q13772 614 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 GRM4Q14833 912 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 DUSP28Q4G0W2 176 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 LARP1BQ659C4 914 aaKnown RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 HFE2Q6ZVN8 426 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 TMTC3Q6ZXV5 915 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 BPHLQ86WA6 291 aaPredicted RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 TRIM22Q8IYM9 498 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 FANCBQ8NB91 859 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 NEK9Q8TD19 979 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 MORC4Q8TE76 937 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 FOXJ1Q92949 421 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 MKL1Q969V6 931 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 GBP4Q96PP9 640 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 PURBQ96QR8 312 aaKnown RBP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 CTAGE1Q96RT6 745 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 TMEM47Q9BQJ4 181 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 SLC26A6Q9BXS9 759 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 FTOQ9C0B1 505 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC1-205ENST00000472928 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 RNF146Q9NTX7 359 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 MTMR4Q9NYA4 1195 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 FEM1BQ9UK73 627 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 MTUS1Q9ULD2 1270 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 MTMR6Q9Y217 621 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 ZDHHC9Q9Y397 364 aa7.3□□□□□ -1.24
HDAC1-205ENST00000472928 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 MYL3P08590 195 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 KCNJ6P48051 423 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 GUCY1B3Q02153 619 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 ZP2Q05996 745 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 KCNA1Q09470 495 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 COL19A1Q14993 1142 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 PPP2R5BQ15173 497 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 NFKBIBQ15653 356 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 NTRK3Q16288 839 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 CCDC96Q2M329 555 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 NBPF20Q3BBV1 942 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 FERMT3Q86UX7 667 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 PRSS33Q8NF86 280 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 C8orf76Q96K31 380 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 AIFM3Q96NN9 605 aa7.29□□□□□ -1.24
HDAC1-205ENST00000472928 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 MTG1Q9BT17 334 aaPredicted RBP7.29□□□□□ -1.24
HDAC1-205ENST00000472928 ALG1Q9BT22 464 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms