RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 CDY2AQ9Y6F7 541 aa13.09□□□□□ -0.31
COL4A3-205ENST00000471862 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 SMIM35A0A1B0GVV1 85 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 POTEB3A0JP26 581 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 HBP1O60381 514 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 NLRP5P59047 1200 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
COL4A3-205ENST00000471862 SCRN1Q12765 414 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 STK3Q13188 491 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 GRB10Q13322 594 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
COL4A3-205ENST00000471862 PRR16Q569H4 304 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 POTEBQ6S5H4 581 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 ATP8B4Q8TF62 1192 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 TGS1Q96RS0 853 aaKnown RBP13.08□□□□□ -0.32
COL4A3-205ENST00000471862 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 MAFBQ9Y5Q3 323 aaPredicted RBP13.08□□□□□ -0.32
COL4A3-205ENST00000471862 SQORQ9Y6N5 450 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.32
COL4A3-205ENST00000471862 COL1A2P08123 1366 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 ZBTB42B2RXF5 422 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 CPLX1O14810 134 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 USP11P51784 963 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 KRT76Q01546 638 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 FAM160B1Q5W0V3 765 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 KRT40Q6A162 431 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 MIS18BP1Q6P0N0 1132 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
COL4A3-205ENST00000471862 MTHFD1LQ6UB35 978 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 TSHZ1Q6ZSZ6 1077 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-205ENST00000471862 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 ATXN2LQ8WWM7 1075 aaKnown RBP13.07□□□□□ -0.32
COL4A3-205ENST00000471862 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-205ENST00000471862 AGO3Q9H9G7 860 aaKnown RBP13.07□□□□□ -0.32
COL4A3-205ENST00000471862 SUGCTQ9HAC7 445 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 THEGQ9P2T0 379 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 TRPV2Q9Y5S1 764 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
COL4A3-205ENST00000471862 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 BACH1O14867 736 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 MSH4O15457 936 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-205ENST00000471862 PFKFB2O60825 505 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 KLRC1P26715 233 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 TJAP1Q5JTD0 557 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 GDPD5Q8WTR4 605 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 MBOAT7Q96N66 472 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
COL4A3-205ENST00000471862 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
COL4A3-205ENST00000471862 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 CYP3A7-CYP3A51PA0A087WV96 503 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 ENPP3O14638 875 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 PSAPP07602 524 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 CYP3A7P24462 503 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 AK2P54819 239 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 Q4G0T1 1027 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 ZNF484Q5JVG2 852 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 IER5Q5VY09 327 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 B3GNT9Q6UX72 402 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 NME8Q8N427 588 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-205ENST00000471862 SLC5A5Q92911 643 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 RIT2Q99578 217 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 C17orf80Q9BSJ5 609 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 PHF20Q9BVI0 1012 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 CELF4Q9BZC1 486 aaKnown RBP13.05□□□□□ -0.32
COL4A3-205ENST00000471862 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-205ENST00000471862 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
COL4A3-205ENST00000471862 ATG2AQ2TAZ0 1938 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 ZNF862O60290 1169 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 PSMD10O75832 226 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 CDKL5O76039 1030 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 UPP2O95045 317 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 CTDNEP1O95476 244 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 TDP2O95551 362 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 C22orf31O95567 290 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 LINC00271P0C7V0 271 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 CD52P31358 61 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
COL4A3-205ENST00000471862 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-205ENST00000471862 KIAA0319LQ8IZA0 1049 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms