RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 ZMYND12Q9H0C1 365 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 LMCD1Q9NZU5 365 aa11.15□□□□□ -0.62
RPRD1B-204ENST00000471511 MYO7AQ13402 2215 aa11.15□□□□□ -0.63
RPRD1B-204ENST00000471511 H3BNC9 293 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 GRM6O15303 877 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 MGEA5O60502 916 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 RCAN1P53805 252 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 EVCP57679 992 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 CAMK1Q14012 370 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 NPY5RQ15761 445 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 BLOC1S2Q6QNY1 142 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 KIAA0319LQ8IZA0 1049 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 HLA-CQ95604 372 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 AIFM3Q96NN9 605 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 YME1L1Q96TA2 773 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 EPHX3Q9H6B9 360 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 VPS54Q9P1Q0 977 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 PADI3Q9ULW8 664 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
RPRD1B-204ENST00000471511 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 HMGB1P09429 215 aaKnown RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 DNAJB1P25685 340 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 KLRC1P26715 233 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 GPM6BQ13491 265 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 TCEAL5Q5H9L2 206 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 SWSAP1Q6NVH7 229 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 TSHZ1Q6ZSZ6 1077 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 NIPA1Q7RTP0 329 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 TRMT1LQ7Z2T5 733 aaKnown RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF713Q8N859 430 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 APBB2Q92870 758 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 PPP1R16BQ96T49 567 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 SDF4Q9BRK5 362 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 CELF4Q9BZC1 486 aaKnown RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 UBE2ZQ9H832 354 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 ZSWIM6Q9HCJ5 1215 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 COG5Q9UP83 839 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 NOC2LQ9Y3T9 749 aaKnown RBP11.13□□□□□ -0.63
RPRD1B-204ENST00000471511 RRN3P2A6NIE6 340 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 IPO5O00410 1097 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF862O60290 1169 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 DGKIO75912 1065 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 IL9P15248 144 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 IFNAR1P17181 557 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 CIITAP33076 1130 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF76P36508 570 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 LTBRP36941 435 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 UGCGQ16739 394 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 ATP8B4Q8TF62 1192 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 MRPL38Q96DV4 380 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 UPF3BQ9BZI7 483 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 AZI2Q9H6S1 392 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 ERVK-5Q9HDB9 667 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 TRPV2Q9Y5S1 764 aa11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 MRPL42Q9Y6G3 142 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-204ENST00000471511 IGSF9BQ9UPX0 1349 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 TTC3P53804 2025 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 M0R2N6 131 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 MSH4O15457 936 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 STBD1O95210 358 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 C22orf31O95567 290 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 KCNA5P22460 613 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 BMPR1AP36894 532 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 FGD1P98174 961 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 DLX2Q07687 328 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 COL19A1Q14993 1142 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 PRR16Q569H4 304 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 FIBCD1Q8N539 461 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 LINC01465Q8N7H1 131 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 NEK9Q8TD19 979 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 CLP1Q92989 425 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF668Q96K58 619 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF577Q9BSK1 485 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ZNF302Q9NR11 478 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 PCDHGC5Q9Y5F6 944 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ATG2AQ2TAZ0 1938 aa11.11□□□□□ -0.63
RPRD1B-204ENST00000471511 ADGRA3Q8IWK6 1321 aa11.1□□□□□ -0.63
RPRD1B-204ENST00000471511 KDM3AQ9Y4C1 1321 aa11.1□□□□□ -0.63
RPRD1B-204ENST00000471511 KAT6AQ92794 2004 aa11.1□□□□□ -0.63
RPRD1B-204ENST00000471511 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms