RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 PRCPP42785 496 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 TOB1P50616 345 aaPredicted RBP4.59□□□□□ -1.68
VPS50-210ENST00000471188 ARID5AQ03989 594 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 GFPT1Q06210 699 aaPredicted RBP4.59□□□□□ -1.68
VPS50-210ENST00000471188 CUL1Q13616 776 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 MAP7Q14244 749 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 DIXDC1Q155Q3 683 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 SFMBT2Q5VUG0 894 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 IRGCQ6NXR0 463 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 OLFML1Q6UWY5 402 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 PI16Q6UXB8 463 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 RRAGAQ7L523 313 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 PIGWQ7Z7B1 504 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 TRIM22Q8IYM9 498 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 CMTR1Q8N1G2 835 aaKnown RBP4.59□□□□□ -1.68
VPS50-210ENST00000471188 PPFIBP2Q8ND30 876 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 LINS1Q8NG48 757 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 LRRC8CQ8TDW0 803 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 C17orf50Q8WW18 174 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 FERMT2Q96AC1 680 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 MTMR8Q96EF0 704 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 TMEM237Q96Q45 408 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 IWS1Q96ST2 819 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.59□□□□□ -1.68
VPS50-210ENST00000471188 NOC4LQ9BVI4 516 aaKnown RBP4.59□□□□□ -1.68
VPS50-210ENST00000471188 AZI2Q9H6S1 392 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 KCNMB3Q9NPA1 279 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 HELLSQ9NRZ9 838 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 RNF14Q9UBS8 474 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 TMCO1Q9UM00 188 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 ANGEL1Q9UNK9 670 aaKnown RBP4.59□□□□□ -1.68
VPS50-210ENST00000471188 MAST3O60307 1309 aa4.59□□□□□ -1.68
VPS50-210ENST00000471188 MYH6P13533 1939 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 JCADQ9P266 1359 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 OVOS2A0A0G2JMS6 1433 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 OVOS2A0A0J9YW53 1432 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 OVOS2Q6IE36 1432 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 KIF20BQ96Q89 1820 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ADGRB3O60242 1522 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 TRIM75PA6NK02 468 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 H0YGN5 161 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ENTPD5O75356 428 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 GFPT2O94808 682 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 FGAP02671 866 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 TPBGLP0DKB5 382 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ACADSP16219 412 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ZNF24P17028 368 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 CYP11B2P19099 503 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 BNIP1Q12981 228 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 PRPF4BQ13523 1007 aaKnown RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 MAP7D1Q3KQU3 841 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS50-210ENST00000471188 KLHDC7AQ5VTJ3 777 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 OR52E8Q6IFG1 317 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 OTUD6AQ7L8S5 288 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ZNF572Q7Z3I7 529 aaPredicted RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 TMEM110Q86TL2 294 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 MAP7D3Q8IWC1 876 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 SULF1Q8IWU6 871 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 CSGALNACT2Q8N6G5 542 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 FITM2Q8N6M3 262 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 RBBP8NLQ8NC74 664 aaPredicted RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 SMC1BQ8NDV3 1235 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 SUPT20HQ8NEM7 779 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 IL17REQ8NFR9 667 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 DTX3LQ8TDB6 740 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 CTNNBL1Q8WYA6 563 aaPredicted RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 HAUS1Q96CS2 278 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 PBKQ96KB5 322 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 PURBQ96QR8 312 aaKnown RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 HAUS7Q99871 368 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 NEUROG2Q9H2A3 272 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 UNC45AQ9H3U1 944 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 THAP9Q9H5L6 903 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 LRRC4CQ9HCJ2 640 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ARHGEF3Q9NR81 526 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 FAM114A2Q9NRY5 505 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 NLRP2Q9NX02 1062 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 CYP39A1Q9NYL5 469 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 SPATA7Q9P0W8 599 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 STOML1Q9UBI4 398 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 AMACRQ9UHK6 382 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 SALL4Q9UJQ4 1053 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 ZNF510Q9Y2H8 683 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 LRCH1Q9Y2L9 728 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 NFS1Q9Y697 457 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 RFX7Q2KHR2 1363 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 A0A1W2PQC6 194 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 RNF223E7ERA6 249 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 E2F6O75461 281 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 IFIT1P09914 478 aaKnown RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 TARSP26639 723 aaKnown RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 SERPINB3P29508 390 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 SLC1A4P43007 532 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 PSMC4P43686 418 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 TIMM10P62072 90 aa4.58□□□□□ -1.68
VPS50-210ENST00000471188 IFI35P80217 286 aaPredicted RBP4.58□□□□□ -1.68
VPS50-210ENST00000471188 RASA3Q14644 834 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms