RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 WHAMMQ8TF30 809 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 CASKIN2Q8WXE0 1202 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 METTL14Q9HCE5 456 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 EPB41L5Q9HCM4 733 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 TYW1Q9NV66 732 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 NAGPAQ9UK23 515 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 VAV3Q9UKW4 847 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 ASTN1O14525 1302 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 GTPBP10A4D1E9 387 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 FAM153BP0C7A2 387 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 EPS15P42566 896 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 CRKP46108 304 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 GUCY2DQ02846 1103 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 NFIL3Q16649 462 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 EXOC3L4Q17RC7 722 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 FAM153CQ494X1 144 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 PRR16Q569H4 304 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 SLFN11Q7Z7L1 901 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 GMCL1P1Q8NEA9 526 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 RBM46Q8TBY0 533 aaKnown RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 ACTRT1Q8TDG2 376 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 BORCS6Q96GS4 357 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 PBKQ96KB5 322 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 POLR3CQ9BUI4 534 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-209ENST00000470026 AMNQ9BXJ7 453 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 IDI2Q9BXS1 227 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 FAM153AQ9UHL3 310 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 NFU1Q9UMS0 254 aa14.96□□□□□ -0.01
BRCA1-209ENST00000470026 A0A0A6YYK5 440 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 ZSCAN5CA6NGD5 496 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 FAM86B1E9PN63 330 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 AKAP3O75969 853 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 KIF4AO95239 1232 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 CYP3A4P08684 503 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 FAM86B2P0C5J1 330 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 ARID5AQ03989 594 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 PABPC4Q13310 644 aaKnown RBP eCLIP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 IFI16Q16666 785 aaKnown RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 SLC35C1Q96A29 364 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 GJD4Q96KN9 370 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 CALR3Q96L12 384 aaKnown RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 KRT12Q99456 494 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 INTUQ9ULD6 942 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 ZNF646O15015 1829 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 ZNF233A6NK53 670 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 XRCC5P13010 732 aaKnown RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 HSPA9P38646 679 aaKnown RBP14.95□□□□□ -0.02
BRCA1-209ENST00000470026 TNNC1P63316 161 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 RPS6KA1Q15418 735 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 UIMC1Q96RL1 719 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 RUFY1Q96T51 708 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 TRIM34Q9BYJ4 488 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 OLFML3Q9NRN5 406 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 PI4KBQ9UBF8 816 aa14.95□□□□□ -0.02
BRCA1-209ENST00000470026 OPLAHO14841 1288 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 RAD51CO43502 376 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 EYA4O95677 639 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 NR3C1P04150 777 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 RPL13P26373 211 aaKnown RBP14.94□□□□□ -0.02
BRCA1-209ENST00000470026 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
BRCA1-209ENST00000470026 SHROOM1Q2M3G4 852 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-209ENST00000470026 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-209ENST00000470026 BTNL9Q6UXG8 535 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 SH3BP5LQ7L8J4 393 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 TEX2Q8IWB9 1127 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 OLIG1Q8TAK6 271 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 CCDC43Q96MW1 224 aaKnown RBP14.94□□□□□ -0.02
BRCA1-209ENST00000470026 SPAG5Q96R06 1193 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 FAM198AQ9UFP1 575 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 STXBP5LQ9Y2K9 1186 aa14.94□□□□□ -0.02
BRCA1-209ENST00000470026 DDTLA6NHG4 134 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 MSH4O15457 936 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 GFPT2O94808 682 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ECHS1P30084 290 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 NPEPPSP55786 919 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 GNGT1P63211 74 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 HDLBPQ00341 1268 aaKnown RBP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 DOK7Q18PE1 504 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ALKBH5Q6P6C2 394 aaKnown RBP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 KDM7AQ6ZMT4 941 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 TMEM179Q6ZVK1 233 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 FBXO11Q86XK2 927 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 TPCN2Q8NHX9 752 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 TAF4BQ92750 862 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ISCUQ9H1K1 167 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ZHX3Q9H4I2 956 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 PLEKHA4Q9H4M7 779 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 SPATA31A6Q5VVP1 1343 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ESYT3A0FGR9 886 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 F5H6K3 240 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 PIK3CDO00329 1044 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 MEIS1O00470 390 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 EIF3DO15371 548 aaKnown RBP eCLIP14.93□□□□□ -0.02
BRCA1-209ENST00000470026 ZEB2O60315 1214 aa14.93□□□□□ -0.02
BRCA1-209ENST00000470026 FLOT1O75955 427 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms