RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
COL9A3-208ENST00000469802 C17orf80Q9BSJ5 609 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 RC3H2Q9HBD1 1191 aaKnown RBP18.54■□□□□ 0.56
COL9A3-208ENST00000469802 PCDHA2Q9Y5H9 948 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 SQORQ9Y6N5 450 aa18.54■□□□□ 0.56
COL9A3-208ENST00000469802 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 DDX39AO00148 427 aaKnown RBP18.53■□□□□ 0.56
COL9A3-208ENST00000469802 EDIL3O43854 480 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 PPFIA3O75145 1194 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 CCT2P78371 535 aaKnown RBP18.53■□□□□ 0.56
COL9A3-208ENST00000469802 AKAP17AQ02040 695 aaKnown RBP18.53■□□□□ 0.56
COL9A3-208ENST00000469802 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 YME1L1Q96TA2 773 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-208ENST00000469802 SH3GLB2Q9NR46 395 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 VPS54Q9P1Q0 977 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 CYP46A1Q9Y6A2 500 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 COL1A2P08123 1366 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 BDP1A6H8Y1 2624 aa18.53■□□□□ 0.56
COL9A3-208ENST00000469802 KDM3AQ9Y4C1 1321 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 SMIM35A0A1B0GVV1 85 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 ZBTB42B2RXF5 422 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 NEFLP07196 543 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 TFF2Q03403 129 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-208ENST00000469802 ADAMTS19Q8TE59 1207 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 LINC01599Q8WXQ3 324 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 ZNF274Q96GC6 653 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-208ENST00000469802 SAMD11Q96NU1 681 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 ZNF577Q9BSK1 485 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 AGO3Q9H9G7 860 aaKnown RBP18.52■□□□□ 0.56
COL9A3-208ENST00000469802 TBC1D22BQ9NU19 505 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 COG5Q9UP83 839 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 TRPV2Q9Y5S1 764 aa18.52■□□□□ 0.56
COL9A3-208ENST00000469802 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 HBP1O60381 514 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 LINC00271P0C7V0 271 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 IER5Q5VY09 327 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 FAM160B1Q5W0V3 765 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 MTHFD1LQ6UB35 978 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
COL9A3-208ENST00000469802 ZNF302Q9NR11 478 aa18.51■□□□□ 0.55
COL9A3-208ENST00000469802 FNDC1Q4ZHG4 1894 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-208ENST00000469802 BACH1O14867 736 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 UPP2O95045 317 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 BMP1P13497 986 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 ATP4AP20648 1035 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 KRT76Q01546 638 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
COL9A3-208ENST00000469802 AAK1Q2M2I8 961 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 EPC2Q52LR7 807 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 PRR16Q569H4 304 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 MIS18BP1Q6P0N0 1132 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-208ENST00000469802 TRIM22Q8IYM9 498 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 CRIPAKQ8N1N5 446 aa18.5■□□□□ 0.55
COL9A3-208ENST00000469802 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-208ENST00000469802 ADGRA3Q8IWK6 1321 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 TNFRSF10AO00220 468 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 ENPP3O14638 875 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 DEXIO95424 95 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 CD52P31358 61 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 TMEM62Q0P6H9 643 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 NPY5RQ15761 445 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 PDXDC2PQ6P474 469 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 FAM177A1Q8N128 213 aaPredicted RBP18.49■□□□□ 0.55
COL9A3-208ENST00000469802 NME8Q8N427 588 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 UIMC1Q96RL1 719 aa18.49■□□□□ 0.55
COL9A3-208ENST00000469802 CELF4Q9BZC1 486 aaKnown RBP18.49■□□□□ 0.55
COL9A3-208ENST00000469802 H3BNC9 293 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 M0QZ92 97 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 M0R2N6 131 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 KLRC1P26715 233 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 USP11P51784 963 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 KCNQ1P51787 676 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 ZNF484Q5JVG2 852 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 SWSAP1Q6NVH7 229 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 TMEM192Q8IY95 271 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 DAGLBQ8NCG7 672 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 BBXQ8WY36 941 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-208ENST00000469802 HLA-CQ95604 372 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 ZNF689Q96CS4 500 aaPredicted RBP18.48■□□□□ 0.55
COL9A3-208ENST00000469802 IL17RAQ96F46 866 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 FTHL17Q9BXU8 183 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 PCDHA4Q9UN74 947 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 PCDHA10Q9Y5I2 948 aa18.48■□□□□ 0.55
COL9A3-208ENST00000469802 MSH4O15457 936 aa18.47■□□□□ 0.55
COL9A3-208ENST00000469802 C22orf31O95567 290 aa18.47■□□□□ 0.55
COL9A3-208ENST00000469802 NLRP5P59047 1200 aa18.47■□□□□ 0.55
COL9A3-208ENST00000469802 SSRP1Q08945 709 aaKnown RBP18.47■□□□□ 0.55
COL9A3-208ENST00000469802 RTN4RL1Q86UN2 441 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-208ENST00000469802 KIAA0319LQ8IZA0 1049 aa18.47■□□□□ 0.55
COL9A3-208ENST00000469802 SLC5A5Q92911 643 aa18.47■□□□□ 0.55
COL9A3-208ENST00000469802 MRPL38Q96DV4 380 aaKnown RBP18.47■□□□□ 0.55
COL9A3-208ENST00000469802 UHRF1Q96T88 793 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-208ENST00000469802 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms