RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 PRPF3O43395 683 aaKnown RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 HBP1O60381 514 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 UPP2O95045 317 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 ARP10275 920 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 KCNQ1P51787 676 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 PLCB4Q15147 1175 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 POTEBQ6S5H4 581 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 Q6ZUG5 572 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 SMAP1Q8IYB5 467 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 CYP2W1Q8TAV3 490 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 C11orf84Q9BUA3 381 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 RNF26Q9BY78 433 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 UBE2ZQ9H832 354 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-204ENST00000469504 TRPV2Q9Y5S1 764 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 CDY2AQ9Y6F7 541 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 SIP14410 1827 aa12.48□□□□□ -0.41
COL4A3-204ENST00000469504 BDP1A6H8Y1 2624 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 IGSF9BQ9UPX0 1349 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 IPO5O00410 1097 aaKnown RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ENPP3O14638 875 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 STAG3L1P0CL83 205 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 RPS6KB1P23443 525 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 IGBP1P78318 339 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ITGB3BPQ13352 177 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 GPM6BQ13491 265 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 NAALADL2Q58DX5 795 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF484Q5JVG2 852 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ABHD15Q6UXT9 468 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 PLA2G4DQ86XP0 818 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ATP8B4Q8TF62 1192 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 BRF1Q92994 677 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF689Q96CS4 500 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 RC3H2Q9HBD1 1191 aaKnown RBP12.47□□□□□ -0.41
COL4A3-204ENST00000469504 CEP131Q9UPN4 1083 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 SNX14Q9Y5W7 946 aa12.47□□□□□ -0.41
COL4A3-204ENST00000469504 KAT6AQ92794 2004 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 BACH1O14867 736 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 CIITAP33076 1130 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 BMPR1AP36894 532 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 EVCP57679 992 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 KRT76Q01546 638 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 PAK2Q13177 524 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 NPAS4Q8IUM7 802 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
COL4A3-204ENST00000469504 CCDC136Q96JN2 1154 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 PGBD1Q96JS3 809 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 CELF4Q9BZC1 486 aaKnown RBP12.46□□□□□ -0.41
COL4A3-204ENST00000469504 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 NSUN3Q9H649 340 aaKnown RBP12.46□□□□□ -0.41
COL4A3-204ENST00000469504 ZNF302Q9NR11 478 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 SH3GLB2Q9NR46 395 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 FAM50BQ9Y247 325 aa12.46□□□□□ -0.41
COL4A3-204ENST00000469504 DOCK5Q9H7D0 1870 aa12.46□□□□□ -0.42
COL4A3-204ENST00000469504 DHX15O43143 795 aaKnown RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 DGKIO75912 1065 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 IFNAR1P17181 557 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 COL19A1Q14993 1142 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 PKN1Q16512 942 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 CMTR2Q8IYT2 770 aaKnown RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 P2RX5Q93086 422 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 FAM167AQ96KS9 214 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 FAM49AQ9H0Q0 323 aaPredicted RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 AGO3Q9H9G7 860 aaKnown RBP12.45□□□□□ -0.42
COL4A3-204ENST00000469504 TMEM260Q9NX78 707 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 PCDHA10Q9Y5I2 948 aa12.45□□□□□ -0.42
COL4A3-204ENST00000469504 CCNE2O96020 404 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 PSAPP07602 524 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 KLRC1P26715 233 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 CD52P31358 61 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 CTNNB1P35222 781 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 USP11P51784 963 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 NTRK3Q16288 839 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 SKAP1Q86WV1 359 aa12.44□□□□□ -0.42
COL4A3-204ENST00000469504 CCDC60Q8IWA6 550 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms