RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RNMTO43148 476 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 UPP2O95045 317 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 TJP3O95049 919 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 FGFR1OPO95684 399 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 SERPING1P05155 500 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 FAM200BP0CF97 657 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 YY1P25490 414 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RPL13P26373 211 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RASSF2P50749 326 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 CACNA2D1P54289 1103 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 TJP1Q07157 1748 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 EHHADHQ08426 723 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 AIMP1Q12904 312 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 VWA3BQ502W6 1294 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 MFSD5Q6N075 450 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 DDX42Q86XP3 938 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RASGEF1CQ8N431 466 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 FITM2Q8N6M3 262 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 BAP1Q92560 729 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RREB1Q92766 1687 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 UTP4Q969X6 686 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 OLFM3Q96PB7 478 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 MYL10Q9BUA6 226 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 WNK3Q9BYP7 1800 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PUS7LQ9H0K6 701 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 CARD9Q9H257 536 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PREBQ9HCU5 417 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 ZMYND8Q9ULU4 1186 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 USP20Q9Y2K6 914 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 AKAP11Q9UKA4 1901 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 BCORQ6W2J9 1755 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 POTEFA5A3E0 1075 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PALM3A6NDB9 673 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 EIF4E1BA6NMX2 242 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 KCNK3O14649 394 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 KLRC4O43908 158 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 HNRNPCL1O60812 293 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 SHBGP04278 402 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 POTEJP0CG39 1038 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PMS2P54278 862 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 GFPT1Q06210 699 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PTGDRQ13258 359 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 LSAMPQ13449 338 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 MAN2A1Q16706 1144 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 HGSNATQ68CP4 663 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 POTEEQ6S8J3 1075 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 RRAGAQ7L523 313 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 KIAA0825Q8IV33 1275 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 ANKRD13CQ8N6S4 541 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 SMC1BQ8NDV3 1235 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 WDR66Q8TBY9 1149 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 CENPKQ9BS16 269 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 CUEDC2Q9H467 287 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 NMRK1Q9NWW6 199 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 NOC2LQ9Y3T9 749 aaKnown RBP9.79□□□□□ -0.84
SMARCE1-207ENST00000469334 SIGLEC16A6NMB1 481 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 EYA2O00167 538 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 CETN3O15182 167 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 AFPP02771 609 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 MYBL1P10243 752 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 ATP5DP30049 168 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 SERPINB4P48594 390 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 INHBCP55103 352 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 CASP7P55210 303 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 TIMM10P62072 90 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 RCN2Q14257 317 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 CLUL1Q15846 466 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 TDRD12Q587J7 1177 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 ZNF530Q6P9A1 599 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 MAEAQ7L5Y9 396 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 FAM13CQ8NE31 585 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 ANKS1AQ92625 1134 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 GATA6Q92908 595 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 SPATA16Q9BXB7 569 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 EPB41L4BQ9H329 900 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 AZI2Q9H6S1 392 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 FGFR1OP2Q9NVK5 253 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
SMARCE1-207ENST00000469334 RGPD2P0DJD1 1756 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 FAM187AA6NFU0 413 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 KRIT1O00522 736 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 TRAFD1O14545 582 aaPredicted RBP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 CEP104O60308 925 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 ITGA6P23229 1130 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 KLRC1P26715 233 aa9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 FKBP4Q02790 459 aaKnown RBP eCLIP9.77□□□□□ -0.84
SMARCE1-207ENST00000469334 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms