RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 IER5Q5VY09 327 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 ADGRD2Q7Z7M1 963 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 SGMS1Q86VZ5 419 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 C11orf84Q9BUA3 381 aaPredicted RBP14.02□□□□□ -0.17
HDAC3-204ENST00000469207 ANO3Q9BYT9 981 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 CELF4Q9BZC1 486 aaKnown RBP14.02□□□□□ -0.17
HDAC3-204ENST00000469207 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.17
HDAC3-204ENST00000469207 RIC8AQ9NPQ8 531 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 GINS2Q9Y248 185 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 TRPV2Q9Y5S1 764 aa14.02□□□□□ -0.17
HDAC3-204ENST00000469207 SMCO2A6NFE2 343 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 PRR33A8MZF0 331 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 STXBP3O00186 592 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 MBTPS2O43462 519 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 MGEA5O60502 916 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 TBX10O75333 385 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
HDAC3-204ENST00000469207 ADAM15Q13444 863 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 CEP55Q53EZ4 464 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 APOA5Q6Q788 366 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 MTHFD1LQ6UB35 978 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
HDAC3-204ENST00000469207 RBM23Q86U06 439 aaKnown RBP14.01□□□□□ -0.17
HDAC3-204ENST00000469207 KLHL23Q8NBE8 558 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 SPPL3Q8TCT6 385 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 PPP1R16BQ96T49 567 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 SDF4Q9BRK5 362 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
HDAC3-204ENST00000469207 PCDHA2Q9Y5H9 948 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 LOXHD1Q8IVV2 1947 aa14.01□□□□□ -0.17
HDAC3-204ENST00000469207 RALGAPA2Q2PPJ7 1873 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 FAM86B1E9PN63 330 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 MEIS1O00470 390 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 ATG7O95352 703 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 FAM86B2P0C5J1 330 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 ALADP13716 330 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 CPA1P15085 419 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 ATP4AP20648 1035 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 KLRC1P26715 233 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 CDC27P30260 824 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 JAKMIP3Q5VZ66 844 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 PLPPR4Q7Z2D5 763 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 ADHFE1Q8IWW8 467 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 LMAN2LQ9H0V9 348 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 HCSTQ9UBK5 93 aa14□□□□□ -0.17
HDAC3-204ENST00000469207 NOC2LQ9Y3T9 749 aaKnown RBP14□□□□□ -0.17
HDAC3-204ENST00000469207 NFASCO94856 1347 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 DCXO43602 365 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 MMP1P03956 469 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 ZNF76P36508 570 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 RBM10P98175 930 aaKnown RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 KRT76Q01546 638 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 PAK2Q13177 524 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 SMAD2Q15796 467 aaKnown RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 RTN1Q16799 776 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 ABHD15Q6UXT9 468 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 ALYREFQ86V81 257 aaKnown RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 NPAS4Q8IUM7 802 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 CCDC60Q8IWA6 550 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 KIAA0319LQ8IZA0 1049 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 TMEM40Q8WWA1 233 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 PLVAPQ9BX97 442 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 RWDD3Q9Y3V2 267 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 ARIH1Q9Y4X5 557 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-204ENST00000469207 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
HDAC3-204ENST00000469207 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 M0QZ92 97 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 BACH1O14867 736 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 PER2O15055 1255 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 ZBTB43O43298 467 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 SCG2P13521 617 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 CLK2P49760 499 aaKnown RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 ADCY7P51828 1080 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 PLA2G4DQ86XP0 818 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 FTHL17Q9BXU8 183 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 RBM28Q9NW13 759 aaKnown RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 CLEC1BQ9P126 229 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 PRKAG3Q9UGI9 489 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 MUTYHQ9UIF7 546 aa13.98□□□□□ -0.17
HDAC3-204ENST00000469207 NAP1L2Q9ULW6 460 aaPredicted RBP13.98□□□□□ -0.17
HDAC3-204ENST00000469207 KLF18A0A0U1RQI7 1052 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 GOLGA8AA7E2F4 631 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 GOLGA8BA8MQT2 603 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 ZBTB42B2RXF5 422 aa13.97□□□□□ -0.17
HDAC3-204ENST00000469207 NCK2O43639 380 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms