RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 OGDHLQ9ULD0 1010 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 COLQQ9Y215 455 aaPredicted RBP6.63□□□□□ -1.35
SHQ1-205ENST00000468371 SSC5DA1L4H1 1573 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 LAMB2P55268 1798 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.63□□□□□ -1.35
SHQ1-205ENST00000468371 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.63□□□□□ -1.35
SHQ1-205ENST00000468371 RRN3P2A6NIE6 340 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 AMHP03971 560 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 CYBAP13498 195 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 PPARDQ03181 441 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 MFSD10Q14728 455 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 KIAA1755Q5JYT7 1200 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 LRCH2Q5VUJ6 765 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 TMTC3Q6ZXV5 915 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 KIAA1328Q86T90 577 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 DESI2Q9BSY9 194 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 JPH1Q9HDC5 661 aaPredicted RBP6.63□□□□□ -1.35
SHQ1-205ENST00000468371 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
SHQ1-205ENST00000468371 CCNT1O60563 726 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 RPLP2P05387 115 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 ZNF569Q5MCW4 686 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 NCAPH2Q6IBW4 605 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 BTNL9Q6UXG8 535 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 FAM133AQ8N9E0 248 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 SLC7A3Q8WY07 619 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 GOLGA1Q92805 767 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 CCDC47Q96A33 483 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 BAG1Q99933 345 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 TM6SF1Q9BZW5 370 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 EPC1Q9H2F5 836 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 RSPH10B2B2RC85 870 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 ZNF202O95125 648 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PARNO95453 639 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 RSPH10BP0C881 870 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 STAG3L1P0CL83 205 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 ADKP55263 362 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 SMC1AQ14683 1233 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 DNAJC21Q5F1R6 531 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 GALNT17Q6IS24 598 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 ELMSAN1Q6PJG2 1045 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 EXOC8Q8IYI6 725 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 COPS5Q92905 334 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 GDAP1L1Q96MZ0 367 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PURBQ96QR8 312 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PAK6Q9NQU5 681 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 GOLGB1Q14789 3259 aaKnown RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 EFCAB14O75071 495 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 ZNF286BP0CG31 522 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 FOSL2P15408 326 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 MOGSQ13724 837 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 LONRF3Q496Y0 759 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 CEP55Q53EZ4 464 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PPP2R2DQ66LE6 453 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PIK3AP1Q6ZUJ8 805 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 BLIDQ8IZY5 108 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 TBC1D5Q92609 795 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
SHQ1-205ENST00000468371 INO80BQ9C086 356 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 SEPT9Q9UHD8 586 aaPredicted RBP6.62□□□□□ -1.35
SHQ1-205ENST00000468371 SOWAHBA6NEL2 793 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ERLIN2O94905 339 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 SMPD1P17405 629 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 RDXP35241 583 aaKnown RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 CLCN6P51797 869 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 NDUFA8P51970 172 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 POLGP54098 1239 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 HNRNPH2P55795 449 aaKnown RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 KRT76Q01546 638 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 MYL5Q02045 173 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ZSCAN26Q16670 478 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 FKBP15Q5T1M5 1219 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 CCDC181Q5TID7 509 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 PPP1R18Q6NYC8 613 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 METTL7BQ6UX53 244 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 RASGRP2Q7LDG7 609 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 SIAH1Q8IUQ4 282 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 MRFAP1L1Q96HT8 127 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 PPP1R13BQ96KQ4 1090 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 TRPV6Q9H1D0 765 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 LY9Q9HBG7 655 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ZNF302Q9NR11 478 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ZNHIT6Q9NWK9 470 aaKnown RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 MAGEC2Q9UBF1 373 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 SYNRGQ9UMZ2 1314 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 KIAA0754O94854 1291 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ATP2A2P16615 1042 aaKnown RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 SMARCA1P28370 1054 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 ETF1P62495 437 aaKnown RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 KIAA1841Q6NSI8 718 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 SWSAP1Q6NVH7 229 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 MB21D2Q8IYB1 491 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 CAPZA3Q96KX2 299 aa6.61□□□□□ -1.35
SHQ1-205ENST00000468371 RNF26Q9BY78 433 aaPredicted RBP6.61□□□□□ -1.35
SHQ1-205ENST00000468371 IFIH1Q9BYX4 1025 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms