RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.88■■■□□ 2.05
PTCH1-210ENST00000468211 RPS6KB1P23443 525 aa27.88■■■□□ 2.05
PTCH1-210ENST00000468211 ABHD15Q6UXT9 468 aa27.88■■■□□ 2.05
PTCH1-210ENST00000468211 RTN4RL1Q86UN2 441 aaPredicted RBP27.88■■■□□ 2.05
PTCH1-210ENST00000468211 AGXT2Q9BYV1 514 aa27.88■■■□□ 2.05
PTCH1-210ENST00000468211 UBE2ZQ9H832 354 aaPredicted RBP27.88■■■□□ 2.05
PTCH1-210ENST00000468211 PCDHA2Q9Y5H9 948 aa27.88■■■□□ 2.05
PTCH1-210ENST00000468211 CCDC196A0A1B0GTZ2 297 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 ESYT2A0FGR8 921 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 POTEB3A0JP26 581 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 PRPF3O43395 683 aaKnown RBP27.87■■■□□ 2.05
PTCH1-210ENST00000468211 CYP3A4P08684 503 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 NTRK3Q16288 839 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 POTEBQ6S5H4 581 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 CCDC60Q8IWA6 550 aaPredicted RBP27.87■■■□□ 2.05
PTCH1-210ENST00000468211 CCDC136Q96JN2 1154 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 TRPV2Q9Y5S1 764 aa27.87■■■□□ 2.05
PTCH1-210ENST00000468211 IER5Q5VY09 327 aa27.86■■■□□ 2.05
PTCH1-210ENST00000468211 MTHFD1LQ6UB35 978 aa27.86■■■□□ 2.05
PTCH1-210ENST00000468211 FBXL16Q8N461 479 aa27.86■■■□□ 2.05
PTCH1-210ENST00000468211 FIBCD1Q8N539 461 aa27.86■■■□□ 2.05
PTCH1-210ENST00000468211 RASGRP4Q8TDF6 673 aa27.85■■■□□ 2.05
PTCH1-210ENST00000468211 ZNF689Q96CS4 500 aaPredicted RBP27.85■■■□□ 2.05
PTCH1-210ENST00000468211 ADGRA3Q8IWK6 1321 aa27.85■■■□□ 2.05
PTCH1-210ENST00000468211 SMIM35A0A1B0GVV1 85 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 IPO5O00410 1097 aaKnown RBP27.84■■■□□ 2.05
PTCH1-210ENST00000468211 BACH1O14867 736 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 ATP4AP20648 1035 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 REXO1Q8N1G1 1221 aaKnown RBP27.84■■■□□ 2.05
PTCH1-210ENST00000468211 CRIPAKQ8N1N5 446 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 CELF4Q9BZC1 486 aaKnown RBP27.84■■■□□ 2.05
PTCH1-210ENST00000468211 NCOA5Q9HCD5 579 aaKnown RBP27.84■■■□□ 2.05
PTCH1-210ENST00000468211 C6orf50Q9HD87 102 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 PADI3Q9ULW8 664 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 SQORQ9Y6N5 450 aa27.84■■■□□ 2.05
PTCH1-210ENST00000468211 ZBTB42B2RXF5 422 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 RPLP2P05387 115 aaKnown RBP27.83■■■□□ 2.05
PTCH1-210ENST00000468211 KCNA5P22460 613 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 KLRC1P26715 233 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 CTNNB1P35222 781 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 SLC26A2P50443 739 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 PTPROQ16827 1216 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 ATP8B4Q8TF62 1192 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 TNPO1Q92973 898 aaKnown RBP27.83■■■□□ 2.05
PTCH1-210ENST00000468211 IGSF9BQ9UPX0 1349 aa27.83■■■□□ 2.05
PTCH1-210ENST00000468211 EDIL3O43854 480 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 DGKIO75912 1065 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 PDIA3P30101 505 aaKnown RBP27.82■■■□□ 2.04
PTCH1-210ENST00000468211 TCEAL5Q5H9L2 206 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 SWSAP1Q6NVH7 229 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 PDXDC2PQ6P474 469 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 BANK1Q8NDB2 785 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.82■■■□□ 2.04
PTCH1-210ENST00000468211 ZNF577Q9BSK1 485 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 CDHR5Q9HBB8 845 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 ZNF302Q9NR11 478 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 RAPGEFL1Q9UHV5 662 aa27.82■■■□□ 2.04
PTCH1-210ENST00000468211 C5orf67F2Z3F1 127 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 HBP1O60381 514 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 COL9A1P20849 921 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 BMPR1AP36894 532 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 CCT2P78371 535 aaKnown RBP27.81■■■□□ 2.04
PTCH1-210ENST00000468211 KRT76Q01546 638 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 TMEM266Q2M3C6 531 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 FAM160B1Q5W0V3 765 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 CCDC12Q8WUD4 166 aaPredicted RBP27.81■■■□□ 2.04
PTCH1-210ENST00000468211 KHSRPQ92945 711 aaKnown RBP eCLIP27.81■■■□□ 2.04
PTCH1-210ENST00000468211 SLC26A6Q9BXS9 759 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 TMX1Q9H3N1 280 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 CD320Q9NPF0 282 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 KDM3AQ9Y4C1 1321 aa27.81■■■□□ 2.04
PTCH1-210ENST00000468211 M0QZ92 97 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 GRM6O15303 877 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 EVCP57679 992 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 BTG3Q14201 252 aaPredicted RBP27.8■■■□□ 2.04
PTCH1-210ENST00000468211 LEXMQ3ZCV2 418 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 TIGD5Q53EQ6 642 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 MIS18BP1Q6P0N0 1132 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 KIAA0319LQ8IZA0 1049 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 NME8Q8N427 588 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 CLP1Q92989 425 aaKnown RBP27.8■■■□□ 2.04
PTCH1-210ENST00000468211 LENG9Q96B70 501 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 RNF26Q9BY78 433 aaPredicted RBP27.8■■■□□ 2.04
PTCH1-210ENST00000468211 VPS54Q9P1Q0 977 aa27.8■■■□□ 2.04
PTCH1-210ENST00000468211 REC8O95072 547 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 IFNAR1P17181 557 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 PSMA5P28066 241 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 GNA11P29992 359 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 PAK2Q13177 524 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 TOB2Q14106 344 aaPredicted RBP27.79■■■□□ 2.04
PTCH1-210ENST00000468211 PRR16Q569H4 304 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 FTHL17Q9BXU8 183 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 EPHX3Q9H6B9 360 aa27.79■■■□□ 2.04
PTCH1-210ENST00000468211 COL1A2P08123 1366 aa27.78■■■□□ 2.04
PTCH1-210ENST00000468211 RB1P06400 928 aa27.78■■■□□ 2.04
PTCH1-210ENST00000468211 CIITAP33076 1130 aa27.78■■■□□ 2.04
PTCH1-210ENST00000468211 SETQ01105 290 aaPredicted RBP27.78■■■□□ 2.04
PTCH1-210ENST00000468211 AKAP17AQ02040 695 aaKnown RBP27.78■■■□□ 2.04
PTCH1-210ENST00000468211 MCTP2Q6DN12 878 aa27.78■■■□□ 2.04
PTCH1-210ENST00000468211 TRMT1LQ7Z2T5 733 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms