RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 DBF4BQ8NFT6 615 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 AIFM3Q96NN9 605 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 TEKT3Q9BXF9 490 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.24
COMMD3-206ENST00000468179 MSH4O15457 936 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 TLL1O43897 1013 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 GCFC2P16383 781 aaKnown RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 LRCH2Q5VUJ6 765 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 FAM43BQ6ZT52 329 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 RDM1Q8NG50 284 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 DNAJB3Q8WWF6 145 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 BBXQ8WY36 941 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 LENG9Q96B70 501 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 FAM167AQ96KS9 214 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 CEP131Q9UPN4 1083 aa16.51■□□□□ 0.23
COMMD3-206ENST00000468179 YBX2Q9Y2T7 364 aaKnown RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 MAFBQ9Y5Q3 323 aaPredicted RBP16.51■□□□□ 0.23
COMMD3-206ENST00000468179 SMIM35A0A1B0GVV1 85 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 NPY5RQ15761 445 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 INF2Q27J81 1249 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 NEK8Q86SG6 692 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 CCDC60Q8IWA6 550 aaPredicted RBP16.5■□□□□ 0.23
COMMD3-206ENST00000468179 USP38Q8NB14 1042 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 DISC1Q9NRI5 854 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 NRBP2Q9NSY0 501 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 DDX25Q9UHL0 483 aaKnown RBP16.5■□□□□ 0.23
COMMD3-206ENST00000468179 SQORQ9Y6N5 450 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
COMMD3-206ENST00000468179 CHRNA1P02708 482 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 KLRC1P26715 233 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 KRT2P35908 639 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 MRPS6P82932 125 aaKnown RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 LETM2Q2VYF4 491 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 MAFAQ8NHW3 353 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 MBOAT7Q96N66 472 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 UIMC1Q96RL1 719 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 RAD9AQ99638 391 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 IFIH1Q9BYX4 1025 aaKnown RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-206ENST00000468179 SCN5AQ14524 2016 aa16.49■□□□□ 0.23
COMMD3-206ENST00000468179 MAGEB2O15479 319 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 MARCH6O60337 910 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 TDP2O95551 362 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 CA3P07451 260 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 MGAT3Q09327 533 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 ODR4Q5SWX8 454 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 FAM20AQ96MK3 541 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 FAM49AQ9H0Q0 323 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-206ENST00000468179 PRDM12Q9H4Q4 367 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-206ENST00000468179 INSL6Q9Y581 213 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 TRPV2Q9Y5S1 764 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 CDY2AQ9Y6F7 541 aa16.48■□□□□ 0.23
COMMD3-206ENST00000468179 TBX3O15119 743 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 EDIL3O43854 480 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 PSMD10O75832 226 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 GJB5O95377 273 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 LARGE1O95461 756 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 FDPSP14324 419 aaKnown RBP16.47■□□□□ 0.23
COMMD3-206ENST00000468179 MYOGP15173 224 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 RBM25P49756 843 aaKnown RBP16.47■□□□□ 0.23
COMMD3-206ENST00000468179 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
COMMD3-206ENST00000468179 TSHZ1Q6ZSZ6 1077 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 ZNF710Q8N1W2 664 aa16.47■□□□□ 0.23
COMMD3-206ENST00000468179 CHMP2AO43633 222 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 CCNT1O60563 726 aaKnown RBP16.46■□□□□ 0.23
COMMD3-206ENST00000468179 DKC1O60832 514 aaKnown RBP eCLIP16.46■□□□□ 0.23
COMMD3-206ENST00000468179 BAG4O95429 457 aaKnown RBP16.46■□□□□ 0.23
COMMD3-206ENST00000468179 MMP1P03956 469 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 GHRP10912 638 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 TMOD1P28289 359 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 DEFB103AP81534 67 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
COMMD3-206ENST00000468179 FBXO47Q5MNV8 452 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 MYOCDQ8IZQ8 938 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 ETNPPLQ8TBG4 499 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 TRAPPC12Q8WVT3 735 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 FTHL17Q9BXU8 183 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 CELF4Q9BZC1 486 aaKnown RBP16.46■□□□□ 0.23
COMMD3-206ENST00000468179 UNC45AQ9H3U1 944 aa16.46■□□□□ 0.23
COMMD3-206ENST00000468179 KAT6AQ92794 2004 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms