RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 STXBP3O00186 592 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 GRM6O15303 877 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 DGKIO75912 1065 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 ITGB3BPQ13352 177 aaPredicted RBP19.69■□□□□ 0.74
TRIM56-203ENST00000467847 COL19A1Q14993 1142 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
TRIM56-203ENST00000467847 ZNF713Q8N859 430 aaPredicted RBP19.69■□□□□ 0.74
TRIM56-203ENST00000467847 LINC01599Q8WXQ3 324 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 FTHL17Q9BXU8 183 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 TMEM260Q9NX78 707 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 BARHL2Q9NY43 387 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 FAM50BQ9Y247 325 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 SQORQ9Y6N5 450 aa19.69■□□□□ 0.74
TRIM56-203ENST00000467847 KIAA1671Q9BY89 1806 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 POTEB3A0JP26 581 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 GOLGA8AA7E2F4 631 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 GOLGA8BA8MQT2 603 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 MEIS1O00470 390 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 NCK2O43639 380 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 ZNF76P36508 570 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 SREBF1P36956 1147 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 PAK2Q13177 524 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 AP3B2Q13367 1082 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 POTEBQ6S5H4 581 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 GLT8D2Q9H1C3 349 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 PADI3Q9ULW8 664 aa19.68■□□□□ 0.74
TRIM56-203ENST00000467847 KLF18A0A0U1RQI7 1052 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 DDX39AO00148 427 aaKnown RBP19.67■□□□□ 0.74
TRIM56-203ENST00000467847 CSPG5O95196 566 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 SLC26A2P50443 739 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 ADCK5Q3MIX3 580 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 MTHFD1LQ6UB35 978 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 RTN4RL1Q86UN2 441 aaPredicted RBP19.67■□□□□ 0.74
TRIM56-203ENST00000467847 SKAP1Q86WV1 359 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 NPAS4Q8IUM7 802 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 RASEFQ8IZ41 740 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 PLVAPQ9BX97 442 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 CELF4Q9BZC1 486 aaKnown RBP19.67■□□□□ 0.74
TRIM56-203ENST00000467847 NAP1L2Q9ULW6 460 aaPredicted RBP19.67■□□□□ 0.74
TRIM56-203ENST00000467847 IGSF9BQ9UPX0 1349 aa19.67■□□□□ 0.74
TRIM56-203ENST00000467847 C5orf42Q9H799 3197 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 SMIM35A0A1B0GVV1 85 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 BACH1O14867 736 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 ATG7O95352 703 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 CLK2P49760 499 aaKnown RBP19.66■□□□□ 0.74
TRIM56-203ENST00000467847 KRT76Q01546 638 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 KRT32Q14532 448 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 TSGA10IPQ3SY00 556 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 FAM160B1Q5W0V3 765 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 NIPA1Q7RTP0 329 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 CMTR2Q8IYT2 770 aaKnown RBP19.66■□□□□ 0.74
TRIM56-203ENST00000467847 NME8Q8N427 588 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 ALG13Q9NP73 1137 aaKnown RBP19.66■□□□□ 0.74
TRIM56-203ENST00000467847 MRPL42Q9Y6G3 142 aaKnown RBP19.66■□□□□ 0.74
TRIM56-203ENST00000467847 EVPLQ92817 2033 aa19.66■□□□□ 0.74
TRIM56-203ENST00000467847 CCNE2O96020 404 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 MMP1P03956 469 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 STAG3L1P0CL83 205 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 SCG2P13521 617 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 CDC27P30260 824 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 FGD1P98174 961 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 HYAL1Q12794 435 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 CRIPAKQ8N1N5 446 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 FAM217BQ9NTX9 383 aaPredicted RBP19.65■□□□□ 0.74
TRIM56-203ENST00000467847 KDM3AQ9Y4C1 1321 aa19.65■□□□□ 0.74
TRIM56-203ENST00000467847 MYH9P35579 1960 aaKnown RBP19.64■□□□□ 0.74
TRIM56-203ENST00000467847 IGKV6D-21A0A0A0MT36 114 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 FAM86B1E9PN63 330 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 HMGB1P09429 215 aaKnown RBP19.64■□□□□ 0.73
TRIM56-203ENST00000467847 FAM86B2P0C5J1 330 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 KLRC1P26715 233 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 LTBRP36941 435 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 RCAN1P53805 252 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 NHLH1Q02575 133 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 TMEM266Q2M3C6 531 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 CTC1Q2NKJ3 1217 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 PAN2Q504Q3 1202 aaKnown RBP19.64■□□□□ 0.73
TRIM56-203ENST00000467847 JAKMIP3Q5VZ66 844 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 ABHD15Q6UXT9 468 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 PLA2G4DQ86XP0 818 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 ATP8B4Q8TF62 1192 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 P2RX5Q93086 422 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 IGFLR1Q9H665 355 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 PRKAG3Q9UGI9 489 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 LRFN2Q9ULH4 789 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 PLAGL2Q9UPG8 496 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 GINS2Q9Y248 185 aa19.64■□□□□ 0.73
TRIM56-203ENST00000467847 DCXO43602 365 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 HBP1O60381 514 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 IBSPP21815 317 aaPredicted RBP19.63■□□□□ 0.73
TRIM56-203ENST00000467847 ZP2Q05996 745 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 CLUL1Q15846 466 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 PFKFB3Q16875 520 aaPredicted RBP19.63■□□□□ 0.73
TRIM56-203ENST00000467847 MIS18BP1Q6P0N0 1132 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 PDXDC2PQ6P474 469 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
TRIM56-203ENST00000467847 CCDC60Q8IWA6 550 aaPredicted RBP19.63■□□□□ 0.73
TRIM56-203ENST00000467847 KCNH6Q9H252 994 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 TMX1Q9H3N1 280 aa19.63■□□□□ 0.73
TRIM56-203ENST00000467847 ZNF302Q9NR11 478 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms