RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
RB1-202ENST00000467505 PLVAPQ9BX97 442 aa16.4■□□□□ 0.22
RB1-202ENST00000467505 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
RB1-202ENST00000467505 COL1A2P08123 1366 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 SCG2P13521 617 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 GNA11P29992 359 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 CD52P31358 61 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 PTCRAQ6ISU1 281 aaPredicted RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 MIS18BP1Q6P0N0 1132 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 PLA2G4DQ86XP0 818 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 NPAS4Q8IUM7 802 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 RASEFQ8IZ41 740 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 CLP1Q92989 425 aaKnown RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 PPP2R3CQ969Q6 453 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 CELF4Q9BZC1 486 aaKnown RBP16.39■□□□□ 0.21
RB1-202ENST00000467505 IGSF9BQ9UPX0 1349 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
RB1-202ENST00000467505 BDP1A6H8Y1 2624 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 ESYT2A0FGR8 921 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 DGKIO75912 1065 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 CDC27P30260 824 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 KRT76Q01546 638 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 ITGB3BPQ13352 177 aaPredicted RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 TCEAL5Q5H9L2 206 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 TMEM31Q5JXX7 168 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 EP400NLQ6ZTU2 488 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 FAM178BQ8IXR5 827 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 CMTR2Q8IYT2 770 aaKnown RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 REXO1Q8N1G1 1221 aaKnown RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 NEK9Q8TD19 979 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 ATP8B4Q8TF62 1192 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 ZNF689Q96CS4 500 aaPredicted RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 AGO3Q9H9G7 860 aaKnown RBP16.38■□□□□ 0.21
RB1-202ENST00000467505 TBC1D22BQ9NU19 505 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 PADI3Q9ULW8 664 aa16.38■□□□□ 0.21
RB1-202ENST00000467505 IGKV6D-21A0A0A0MT36 114 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 IPO5O00410 1097 aaKnown RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 CYP3A4P08684 503 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 SSTR3P32745 418 aaPredicted RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 TMEM62Q0P6H9 643 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 ZNF484Q5JVG2 852 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 JAKMIP3Q5VZ66 844 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 PDXDC2PQ6P474 469 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 MTHFD1LQ6UB35 978 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 ABHD15Q6UXT9 468 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 GJD3Q8N144 294 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 CCDC148Q8NFR7 591 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 P2RX5Q93086 422 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 ZNF577Q9BSK1 485 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 ZMYND12Q9H0C1 365 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 RC3H2Q9HBD1 1191 aaKnown RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
RB1-202ENST00000467505 CLDND1Q9NY35 253 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 LRFN2Q9ULH4 789 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 HCN4Q9Y3Q4 1203 aa16.37■□□□□ 0.21
RB1-202ENST00000467505 EVPLQ92817 2033 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 KLRC1P26715 233 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 PSMA5P28066 241 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 ADD1P35611 737 aaKnown RBP16.36■□□□□ 0.21
RB1-202ENST00000467505 COL19A1Q14993 1142 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 Q6ZUG5 572 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 CKAP2LQ8IYA6 745 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
RB1-202ENST00000467505 TRAPPC12Q8WVT3 735 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 BRF1Q92994 677 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 EPHX3Q9H6B9 360 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 PRKAG3Q9UGI9 489 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 ATG2AQ2TAZ0 1938 aa16.36■□□□□ 0.21
RB1-202ENST00000467505 KIAA1671Q9BY89 1806 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 FAM86B1E9PN63 330 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 H3BQ06 376 aaPredicted RBP16.35■□□□□ 0.21
RB1-202ENST00000467505 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
RB1-202ENST00000467505 REC8O95072 547 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 MMP1P03956 469 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 FAM86B2P0C5J1 330 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 IL9P15248 144 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 APOBRQ0VD83 1088 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 NFX1Q12986 1120 aaKnown RBP16.35■□□□□ 0.21
RB1-202ENST00000467505 ZNF746Q6NUN9 644 aaPredicted RBP16.35■□□□□ 0.21
RB1-202ENST00000467505 FBXL16Q8N461 479 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
RB1-202ENST00000467505 KCNB2Q92953 911 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 C1orf112Q9NSG2 853 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 NID2Q14112 1375 aa16.35■□□□□ 0.21
RB1-202ENST00000467505 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
RB1-202ENST00000467505 PI4K2BG5E9Z4 385 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms