RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
SMC4-208ENST00000467468 ARHGAP20Q9P2F6 1191 aa5.64□□□□□ -1.51
SMC4-208ENST00000467468 TELO2Q9Y4R8 837 aa5.64□□□□□ -1.51
SMC4-208ENST00000467468 TCRBV5S4A2TA0A5A2 114 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 TCRBV16S1A1N1A0A5B0 115 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 ZNF839A8K0R7 811 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.514e-78■■■■■ 527.9
SMC4-208ENST00000467468 NOBOXO60393 691 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
SMC4-208ENST00000467468 ASLP04424 464 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 ZNF28P17035 718 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 IL13P35225 146 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 IGFALSP35858 605 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 FLT3P36888 993 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 JAM2P57087 298 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 DHCR24Q15392 516 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 SKIDA1Q1XH10 827 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 HHIPL2Q6UWX4 724 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 DDX46Q7L014 1031 aaKnown RBP5.63□□□□□ -1.51
SMC4-208ENST00000467468 STRA8Q7Z7C7 330 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 FMNL3Q8IVF7 1028 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 IGDCC4Q8TDY8 1250 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 RELTQ969Z4 430 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 LCORQ96JN0 433 aaPredicted RBP5.63□□□□□ -1.51
SMC4-208ENST00000467468 TMEM168Q9H0V1 697 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 ARHGAP28Q9P2N2 729 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 TNPO3Q9Y5L0 923 aaKnown RBP5.63□□□□□ -1.51
SMC4-208ENST00000467468 EID1Q9Y6B2 187 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 WASHC2CQ9Y4E1 1318 aa5.63□□□□□ -1.51
SMC4-208ENST00000467468 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 PRAMEF25A6NGN4 478 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 MROH6A6NGR9 719 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 HIP1RO75146 1068 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 AMY2AP04746 511 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 CKMP06732 381 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 AMY2BP19961 511 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 PFKPQ01813 784 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 DBPQ10586 325 aaPredicted RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 FAM50AQ14320 339 aaKnown RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 SMAD2Q15796 467 aaKnown RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 UBXN11Q5T124 520 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 MCTP2Q6DN12 878 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 NECAB2Q7Z6G3 386 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 FGD2Q7Z6J4 655 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 PLEKHH3Q7Z736 793 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 LGI4Q8N135 537 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 TXNDC5Q8NBS9 432 aaKnown RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 CXorf38Q8TB03 319 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 LEO1Q8WVC0 666 aaPredicted RBP5.62□□□□□ -1.51
SMC4-208ENST00000467468 SCLYQ96I15 445 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 SMURF1Q9HCE7 757 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 COQ6Q9Y2Z9 468 aa5.62□□□□□ -1.51
SMC4-208ENST00000467468 SLC12A8A0AV02 714 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ACOT7O00154 380 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 OPA1O60313 960 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ALDH1L1O75891 902 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 GUCY2FP51841 1108 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 EPHB1P54762 984 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 HERVK_113P62684 666 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ZNF460Q14592 562 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ARHGAP44Q17R89 818 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 TMEM177Q53S58 311 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ZFYVE27Q5T4F4 411 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 PKN3Q6P5Z2 889 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 DPP8Q6V1X1 898 aaPredicted RBP5.61□□□□□ -1.51
SMC4-208ENST00000467468 C2orf69Q8N8R5 385 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 IGSF22Q8N9C0 903 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ADAM7Q9H2U9 754 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 BARX1Q9HBU1 254 aaPredicted RBP5.61□□□□□ -1.51
SMC4-208ENST00000467468 KCNH7Q9NS40 1196 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 RBPJLQ9UBG7 517 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 TCEAL9Q9UHQ7 104 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 ZFP69BQ9UJL9 534 aa5.61□□□□□ -1.51
SMC4-208ENST00000467468 PHLDB1Q86UU1 1377 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 KRTAP4-8A0A0G2JLE6 195 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 FAM90A27PA6NNH2 459 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 BRINP1O60477 761 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 SYN1P17600 705 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 CNR2P34972 360 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 GLRBP48167 497 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 NEK4P51957 841 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 MLLT6P55198 1093 aaPredicted RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 TTF1Q15361 905 aaPredicted RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 PCBP1Q15365 356 aaKnown RBP eCLIP5.6□□□□□ -1.513e-12■■■■□ 20.8
SMC4-208ENST00000467468 SURF1Q15526 300 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 SEPT7Q16181 437 aaKnown RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 RNF219Q5W0B1 726 aaPredicted RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 ZCCHC8Q6NZY4 707 aaKnown RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 KLHL36Q8N4N3 616 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 WDR48Q8TAF3 677 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 ZCCHC14Q8WYQ9 949 aaKnown RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 YTHDC1Q96MU7 727 aaKnown RBP5.6□□□□□ -1.51
SMC4-208ENST00000467468 BOCQ9BWV1 1114 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 MTFR1LQ9H019 292 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 CABP5Q9NP86 173 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 SLC52A1Q9NWF4 448 aa5.6□□□□□ -1.51
SMC4-208ENST00000467468 GEMIN8Q9NWZ8 242 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms