RNA–Protein interactions for RNA: ENST00000467384.6

CAPN8-207, Transcript of calpain 8, humanhuman

TSL 5

Gene CAPN8, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-207ENST00000467384 DNM3Q9UQ16 869 aa12.36□□□□□ -0.43
CAPN8-207ENST00000467384 CTDP1Q9Y5B0 961 aaPredicted RBP12.36□□□□□ -0.43
CAPN8-207ENST00000467384 POTEMA6NI47 508 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 MYMKA6NI61 221 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 URI1O94763 535 aaPredicted RBP12.35□□□□□ -0.43
CAPN8-207ENST00000467384 SSBP05455 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN8-207ENST00000467384 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
CAPN8-207ENST00000467384 FECHP22830 423 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN8-207ENST00000467384 MAN2A1Q16706 1144 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 DYMQ7RTS9 669 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 MCF2L2Q86YR7 1114 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 REXO1L1PQ8IX06 675 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 NUCKS1Q9H1E3 243 aaKnown RBP12.35□□□□□ -0.43
CAPN8-207ENST00000467384 VCPKMTQ9H867 229 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 MORF4L1Q9UBU8 362 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 PRR12Q9ULL5 1215 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 CAPN11Q9UMQ6 739 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 EYSQ5T1H1 3165 aa12.35□□□□□ -0.43
CAPN8-207ENST00000467384 CDH23Q9H251 3354 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 A0A1W2PQJ5 194 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 TRIM49BA6NDI0 452 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 MEIS2O14770 477 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 GYPCP04921 128 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 FDX1P10109 184 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 COL6A1P12109 1028 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 CYP2B6P20813 491 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 HOXD11P31277 338 aaPredicted RBP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 CAP2P40123 477 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 ZBED6P86452 979 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 STK4Q13043 487 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 USH1GQ495M9 461 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 PRR16Q569H4 304 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 SH3D19Q5HYK7 790 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 ANKRD40Q6AI12 368 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 CCDC170Q8IYT3 715 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 ANKRD7Q92527 254 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 UBXN4Q92575 508 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 HAS1Q92839 578 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 FEZ1Q99689 392 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 SLC39A2Q9NP94 309 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
CAPN8-207ENST00000467384 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
CAPN8-207ENST00000467384 XRCC5P13010 732 aaKnown RBP12.33□□□□□ -0.44
CAPN8-207ENST00000467384 RPA1P27694 616 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
CAPN8-207ENST00000467384 CCDC40Q4G0X9 1142 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 VWA3BQ502W6 1294 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 GPBP1Q86WP2 473 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 LPAR1Q92633 364 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 DUSP9Q99956 384 aaKnown RBP12.33□□□□□ -0.44
CAPN8-207ENST00000467384 NUDT12Q9BQG2 462 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 WDR11Q9BZH6 1224 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
CAPN8-207ENST00000467384 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
CAPN8-207ENST00000467384 FAM184BQ9ULE4 1060 aa12.33□□□□□ -0.44
CAPN8-207ENST00000467384 POTEB2H3BUK9 544 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 CALUO43852 315 aaPredicted RBP12.32□□□□□ -0.44
CAPN8-207ENST00000467384 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
CAPN8-207ENST00000467384 FCER1AP12319 257 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 GAP43P17677 238 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 COASYQ13057 564 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 LRRC26Q2I0M4 334 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 HERC4Q5GLZ8 1057 aaPredicted RBP12.32□□□□□ -0.44
CAPN8-207ENST00000467384 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
CAPN8-207ENST00000467384 CEP112Q8N8E3 955 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
CAPN8-207ENST00000467384 GUCD1Q96NT3 240 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms