RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ZMYM1Q5SVZ6 1142 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 MILR1Q7Z6M3 343 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.39□□□□□ -1.55
VPS13A-209ENST00000467124 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 CPA6Q8N4T0 437 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 ZNF610Q8N9Z0 462 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 ARRDC4Q8NCT1 418 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 LMBR1Q8WVP7 490 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 TIFAQ96CG3 184 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 PEX11GQ96HA9 241 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 POFUT1Q9H488 388 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 RC3H2Q9HBD1 1191 aaKnown RBP5.39□□□□□ -1.55
VPS13A-209ENST00000467124 ANLNQ9NQW6 1124 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 SPEF1Q9Y4P9 236 aa5.39□□□□□ -1.55
VPS13A-209ENST00000467124 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 ACOT7O00154 380 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 HRKO00198 91 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 KIF3BO15066 747 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TADA3O75528 432 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 ZBTB7AO95365 584 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 LPLP06858 475 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 CD40P25942 277 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 RECQLP46063 649 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 RHBDL3P58872 404 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 CCT2P78371 535 aaKnown RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 SLC9A5Q14940 896 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 EFCAB2Q5VUJ9 269 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 OLFML2BQ68BL8 750 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 PAQR3Q6TCH7 311 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TTLL7Q6ZT98 887 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 ATG4DQ86TL0 474 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TRIM48Q8IWZ4 208 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TCEAL8Q8IYN2 117 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 PPM1NQ8N819 430 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 PMM1Q92871 262 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 EAF2Q96CJ1 260 aaPredicted RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TEKT5Q96M29 485 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 SLC6A17Q9H1V8 727 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 PRDM12Q9H4Q4 367 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 ACSS2Q9NR19 701 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 DNAJC28Q9NX36 388 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 ASH2LQ9UBL3 628 aa5.38□□□□□ -1.55
VPS13A-209ENST00000467124 DBR1Q9UK59 544 aaKnown RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 YBX2Q9Y2T7 364 aaKnown RBP5.38□□□□□ -1.55
VPS13A-209ENST00000467124 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 PRAMEF22A3QJZ6 481 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 NUDT19A8MXV4 375 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 F8W031 263 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 CFBP00751 764 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 KRT18P05783 430 aaKnown RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 DBHP09172 617 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 MC4RP32245 332 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 EPHA5P54756 1037 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 PHC1P78364 1004 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 SYCP2LQ5T4T6 812 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 GPR158Q5T848 1215 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 PRAMEF18Q5VWM3 479 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 FRMD7Q6ZUT3 714 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 CCAR1Q8IX12 1150 aaKnown RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 HIPK4Q8NE63 616 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 ABHD4Q8TB40 342 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 JADE3Q92613 823 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 SHISA4Q96DD7 197 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 CLIP3Q96DZ5 547 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 HSPBAP1Q96EW2 488 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 GBP4Q96PP9 640 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 SLC13A1Q9BZW2 595 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 CHST12Q9NRB3 414 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 GEMIN8Q9NWZ8 242 aaKnown RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 RBPJLQ9UBG7 517 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 DDX20Q9UHI6 824 aaKnown RBP5.37□□□□□ -1.55
VPS13A-209ENST00000467124 ANKRD6Q9Y2G4 727 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 MRFAP1Q9Y605 127 aa5.37□□□□□ -1.55
VPS13A-209ENST00000467124 KLHL33A6NCF5 533 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ELL2O00472 640 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-209ENST00000467124 BIN1O00499 593 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ABLIM1O14639 778 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 TPD52L2O43399 206 aaKnown RBP5.36□□□□□ -1.55
VPS13A-209ENST00000467124 CAND2O75155 1236 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 RFPL1O75677 317 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ZRANB2O95218 330 aaKnown RBP eCLIP5.36□□□□□ -1.55
VPS13A-209ENST00000467124 CYP17A1P05093 508 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 PDE6BP35913 854 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 GP2P55259 537 aaKnown RBP5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ARHGAP29Q52LW3 1261 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ZBTB41Q5SVQ8 909 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ARTNQ5T4W7 220 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 NXNQ6DKJ4 435 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 CXorf67Q86X51 503 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-209ENST00000467124 IRF2BP1Q8IU81 584 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 ASB15Q8WXK1 588 aa5.36□□□□□ -1.55
VPS13A-209ENST00000467124 TSPAN17Q96FV3 270 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms