RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 LRRC57Q8N9N7 239 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
GAPDH-206ENST00000466525 EYA3Q99504 573 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 TTC7AQ9ULT0 858 aaPredicted RBP16.45■□□□□ 0.22
GAPDH-206ENST00000466525 LEMD3Q9Y2U8 911 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
GAPDH-206ENST00000466525 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 PLCG2P16885 1265 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 CDK8P49336 464 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 CLK2P49760 499 aaKnown RBP16.45■□□□□ 0.22
GAPDH-206ENST00000466525 GUCY1A3Q02108 690 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 PPP2R5EQ16537 467 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 FBXW10Q5XX13 1052 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 KCTD16Q68DU8 428 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 LMBR1Q8WVP7 490 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 KCTD10Q9H3F6 313 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
GAPDH-206ENST00000466525 PGRMC1O00264 195 aaKnown RBP16.44■□□□□ 0.22
GAPDH-206ENST00000466525 CHUKO15111 745 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 TRAPPC3O43617 180 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 SLC37A4O43826 429 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 RASSF9O75901 435 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 FTCDO95954 541 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 HSD17B3P37058 310 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 MNAT1P51948 309 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 DPY19L2P1Q6NXN4 242 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 CCDC50Q8IVM0 306 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 PIGSQ96S52 555 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 HINFPQ9BQA5 517 aa16.44■□□□□ 0.22
GAPDH-206ENST00000466525 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.44■□□□□ 0.222e-16■■■■■ 35.4
GAPDH-206ENST00000466525 SUCLA2Q9P2R7 463 aaPredicted RBP16.44■□□□□ 0.22
GAPDH-206ENST00000466525 BIN2Q9UBW5 565 aaPredicted RBP16.44■□□□□ 0.22
GAPDH-206ENST00000466525 DIS3Q9Y2L1 958 aaKnown RBP16.44■□□□□ 0.22
GAPDH-206ENST00000466525 GMNCA6NCL1 334 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 H0YHG0 523 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 C21orf2O43822 256 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 SLC34A2O95436 690 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 GOLGA8HP0CJ92 632 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 MRPS25P82663 173 aaKnown RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 IRF2BP2Q7Z5L9 587 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 PLCD3Q8N3E9 789 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 CENPTQ96BT3 561 aa16.43■□□□□ 0.22
GAPDH-206ENST00000466525 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
GAPDH-206ENST00000466525 GPR75-ASB3A0A0A6YYF3 556 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 GOLGA6L7A0A1B0GV03 622 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 TMEM88BA6NKF7 163 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 EIF3BP55884 814 aaKnown RBP16.42■□□□□ 0.22
GAPDH-206ENST00000466525 RAPGEF1Q13905 1077 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 CLUL1Q15846 466 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 SKIDA1Q1XH10 827 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 KCNK18Q7Z418 384 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 MAATS1Q7Z4T9 603 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 CYFIP2Q96F07 1278 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 CNOT10Q9H9A5 744 aaKnown RBP16.42■□□□□ 0.22
GAPDH-206ENST00000466525 FAM114A2Q9NRY5 505 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 TRAF3IP3Q9Y228 551 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 STXBP5LQ9Y2K9 1186 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 POTEMA6NI47 508 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 CETN3O15182 167 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 TDP2O95551 362 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 PDHBP11177 359 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 ZNF844Q08AG5 666 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-206ENST00000466525 STYK1Q6J9G0 422 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 USP17L2Q6R6M4 530 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 CCDC26Q8TAB7 109 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-206ENST00000466525 NUDT12Q9BQG2 462 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 DAAM1Q9Y4D1 1078 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
GAPDH-206ENST00000466525 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
GAPDH-206ENST00000466525 GTPBP10A4D1E9 387 aaKnown RBP16.41■□□□□ 0.22
GAPDH-206ENST00000466525 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 KCNK3O14649 394 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 FLOT1O75955 427 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 GHRP10912 638 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 PPP2R2AP63151 447 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 HDLBPQ00341 1268 aaKnown RBP16.41■□□□□ 0.22
GAPDH-206ENST00000466525 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 SLC44A5Q8NCS7 719 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 TMEM260Q9NX78 707 aa16.41■□□□□ 0.22
GAPDH-206ENST00000466525 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms