RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 KRT79Q5XKE5 535 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 PCDHA2Q9Y5H9 948 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 GSTTP1A0A1W2PQM5 241 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 MSH4O15457 936 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 ADCY6O43306 1168 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 INSRRP14616 1297 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 C16orf70Q9BSU1 422 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 SETD4Q9NVD3 440 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 JAK2O60674 1132 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 SKIP12755 728 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 ZSCAN20P17040 1043 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 GDF6Q6KF10 455 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 RPAINQ86UA6 219 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 HERVK_113Q902F9 699 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 FAM49AQ9H0Q0 323 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 GPR182O15218 404 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 MRPS6P82932 125 aaKnown RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 DEFB128Q7Z7B8 93 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 MBOAT7Q96N66 472 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 ZSCAN16Q9H4T2 348 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 AKT3Q9Y243 479 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 BTBD18B2RXH4 712 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 ATG7O95352 703 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 GUCY1B3Q02153 619 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 KAT2BQ92831 832 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 SAMD11Q96NU1 681 aa12.07□□□□□ -0.48
NPHP3-203ENST00000465756 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 GCOM2Q9BZD3 368 aaPredicted RBP12.07□□□□□ -0.48
NPHP3-203ENST00000465756 TRIM43BA6NCK2 446 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 FAM86B1E9PN63 330 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 GTPBP6O43824 516 aaPredicted RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 FAM86B2P0C5J1 330 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 POLGP54098 1239 aaPredicted RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 PLCB4Q15147 1175 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 SNX21Q969T3 373 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 TRIM43Q96BQ3 446 aaPredicted RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 CALML4Q96GE6 196 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 RNPEPQ9H4A4 650 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 ATP9AO75110 1047 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 MCM7P33993 719 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 PAK2Q13177 524 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 PPP2R5CQ13362 524 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 PPP2R5AQ15172 486 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 SF3A1Q15459 793 aaKnown RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 NACC1Q96RE7 527 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 TUFT1Q9NNX1 390 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 ANKEF1Q9NU02 776 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 GOLGB1Q14789 3259 aaKnown RBP12.06□□□□□ -0.48
NPHP3-203ENST00000465756 IGLV3-22A0A075B6J6 115 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 TDP2O95551 362 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 PRKCEQ02156 737 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 LMBR1Q8WVP7 490 aa12.06□□□□□ -0.48
NPHP3-203ENST00000465756 CSF2RAP15509 400 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 SFPQP23246 707 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPHP3-203ENST00000465756 TXKP42681 527 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 SP2Q02086 613 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 TMEM132AQ24JP5 1023 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 XKR9Q5GH70 373 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 MCPH1Q8NEM0 835 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 PPP2R3CQ969Q6 453 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 AIFM3Q96NN9 605 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 NT5C3AQ9H0P0 336 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 ARHGEF35A5YM69 484 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 CKBP12277 381 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 PCBP1Q15365 356 aaKnown RBP eCLIP12.05□□□□□ -0.48
NPHP3-203ENST00000465756 FAM109BQ6ICB4 259 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-203ENST00000465756 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
NPHP3-203ENST00000465756 ABCD1P33897 745 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 ITGB3BPQ13352 177 aaPredicted RBP12.05□□□□□ -0.48
NPHP3-203ENST00000465756 CEP170P1Q96L14 293 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 PCDHA11Q9Y5I1 949 aa12.05□□□□□ -0.48
NPHP3-203ENST00000465756 H0YCG3 227 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 RPS6KA5O75582 802 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 KLRC1P26715 233 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 ZBTB8OSQ8IWT0 167 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 C4orf19Q8IY42 314 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 PSPC1Q8WXF1 523 aaKnown RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 PYM1Q9BRP8 204 aaKnown RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 TTC12Q9H892 705 aaPredicted RBP12.04□□□□□ -0.48
NPHP3-203ENST00000465756 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 SCN10AQ9Y5Y9 1956 aa12.04□□□□□ -0.48
NPHP3-203ENST00000465756 PSMD10O75832 226 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms