RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZNF444Q8N0Y2 327 aaPredicted RBP21.51■■□□□ 1.03
SDF4-205ENST00000465727 PANK4Q9NVE7 773 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 NIP7Q9Y221 180 aaKnown RBP eCLIP21.51■■□□□ 1.032e-9■□□□□ 9.6
SDF4-205ENST00000465727 STXBP5LQ9Y2K9 1186 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 DIS3Q9Y2L1 958 aaKnown RBP21.51■■□□□ 1.03
SDF4-205ENST00000465727 CCDC189A1A4V9 331 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 USP17L3A6NCW0 530 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 USP17L4A6NCW7 530 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 OPLAHO14841 1288 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 PPP1R7Q15435 360 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 EDRF1Q3B7T1 1238 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 USP17L1Q7RTZ2 530 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 PIGWQ7Z7B1 504 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 VPS36Q86VN1 386 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 FAXDC2Q96IV6 333 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 CCDC134Q9H6E4 229 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.51■■□□□ 1.031e-7■■■■□ 19.9
SDF4-205ENST00000465727 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
SDF4-205ENST00000465727 TTI1O43156 1089 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 MMP13P45452 471 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 CCDC63Q8NA47 563 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 SPAG5Q96R06 1193 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 TRIM6Q9C030 488 aaPredicted RBP21.5■■□□□ 1.03
SDF4-205ENST00000465727 CCDC87Q9NVE4 849 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 NENFQ9UMX5 172 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 STX8Q9UNK0 236 aa21.5■■□□□ 1.03
SDF4-205ENST00000465727 CCDC169A6NNP5 214 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 ATP2C2O75185 946 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 POU5F1Q01860 360 aaKnown RBP21.49■■□□□ 1.03
SDF4-205ENST00000465727 SF3B3Q15393 1217 aaKnown RBP21.49■■□□□ 1.03
SDF4-205ENST00000465727 CCDC65Q8IXS2 484 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 HES6Q96HZ4 224 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 ZNF287Q9HBT7 754 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 SAMD15Q9P1V8 674 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 BIN2Q9UBW5 565 aaPredicted RBP21.49■■□□□ 1.03
SDF4-205ENST00000465727 POTEMA6NI47 508 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 BACH1O14867 736 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 RTN2O75298 545 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 MMEP08473 750 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 GOLGA8HP0CJ92 632 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 PRDX5P30044 214 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 SATB1Q01826 763 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 KCNH2Q12809 1159 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 CLUL1Q15846 466 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 ENOX2Q16206 610 aaKnown RBP21.49■■□□□ 1.03
SDF4-205ENST00000465727 SPTY2D1Q68D10 685 aaPredicted RBP21.49■■□□□ 1.03
SDF4-205ENST00000465727 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 KCNK18Q7Z418 384 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 NT5C3AQ9H0P0 336 aa21.49■■□□□ 1.03
SDF4-205ENST00000465727 BUB1BO60566 1050 aaPredicted RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 H2AFZP0C0S5 128 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 ITGA4P13612 1032 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 UCHL3P15374 230 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 H2AFVQ71UI9 128 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 NT5DC3Q86UY8 548 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 NAP1L3Q99457 506 aaPredicted RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 NSRP1Q9H0G5 558 aaKnown RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 KCTD10Q9H3F6 313 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 BAIAP2L1Q9UHR4 511 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 PNMA2Q9UL42 364 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 ATP8A1Q9Y2Q0 1164 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 KDM3AQ9Y4C1 1321 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 WTIPA6NIX2 430 aaPredicted RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 PPP1R12AO14974 1030 aaPredicted RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 CETN3O15182 167 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 SLC37A4O43826 429 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 CAND2O75155 1236 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 CHN1P15882 459 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 ATXN2LQ8WWM7 1075 aaKnown RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 DYNLL2Q96FJ2 89 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 PABPC3Q9H361 631 aaKnown RBP21.48■■□□□ 1.03
SDF4-205ENST00000465727 GOLPH3Q9H4A6 298 aa21.48■■□□□ 1.03
SDF4-205ENST00000465727 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
SDF4-205ENST00000465727 PTENP60484 403 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 ADAM9Q13443 819 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 HYIQ5T013 277 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 MDM1Q8TC05 714 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 NEK9Q8TD19 979 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 ATP8B4Q8TF62 1192 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 MTMR7Q9Y216 660 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 PCDHA2Q9Y5H9 948 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 NAV1Q8NEY1 1877 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 KAT6BQ8WYB5 2073 aa21.47■■□□□ 1.03
SDF4-205ENST00000465727 AFF2P51816 1311 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 FAM187AA6NFU0 413 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 GFPT2O94808 682 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 CALRP27797 417 aaKnown RBP21.46■■□□□ 1.03
SDF4-205ENST00000465727 DPY19L2P1Q6NXN4 242 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 FRMD5Q7Z6J6 570 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 DAAM2Q86T65 1068 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 DZIP1Q86YF9 867 aaKnown RBP21.46■■□□□ 1.03
SDF4-205ENST00000465727 NUDT12Q9BQG2 462 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 DPH5Q9H2P9 285 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 SLC26A4O43511 780 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 DRG2P55039 364 aaKnown RBP21.46■■□□□ 1.03
SDF4-205ENST00000465727 ZNF268Q14587 947 aaPredicted RBP21.46■■□□□ 1.03
SDF4-205ENST00000465727 TRPM8Q7Z2W7 1104 aa21.46■■□□□ 1.03
SDF4-205ENST00000465727 STMN4Q9H169 189 aaPredicted RBP21.46■■□□□ 1.03
SDF4-205ENST00000465727 AMFRQ9UKV5 643 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms