RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 BARX2Q9UMQ3 279 aaPredicted RBP13.53□□□□□ -0.24
CNOT4-208ENST00000465721 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
CNOT4-208ENST00000465721 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
CNOT4-208ENST00000465721 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
CNOT4-208ENST00000465721 IGSF9BQ9UPX0 1349 aa13.53□□□□□ -0.24
CNOT4-208ENST00000465721 PLEKHA8P1O95397 391 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 RPLP2P05387 115 aaKnown RBP13.52□□□□□ -0.25
CNOT4-208ENST00000465721 PTPN5P54829 565 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 IGBP1P78318 339 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 ZXDAP98168 799 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 TCF15Q12870 199 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 IGDCC4Q8TDY8 1250 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 GLG1Q92896 1179 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.25
CNOT4-208ENST00000465721 MAP3K14Q99558 947 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 MYL10Q9BUA6 226 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 LY9Q9HBG7 655 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 PADI3Q9ULW8 664 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 DCHS1Q96JQ0 3298 aa13.52□□□□□ -0.25
CNOT4-208ENST00000465721 DENND4AQ7Z401 1863 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 RRN3P2A6NIE6 340 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 DDAH1O94760 285 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 SCG2P13521 617 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 INSRRP14616 1297 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 SMARCA1P28370 1054 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 TMEM62Q0P6H9 643 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 MTMR1Q13613 665 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
CNOT4-208ENST00000465721 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
CNOT4-208ENST00000465721 STAG3L1P0CL83 205 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 PAK2Q13177 524 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 UBE2SQ16763 222 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 IER5Q5VY09 327 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 RBM23Q86U06 439 aaKnown RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 FBXL6Q8N531 539 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 SPDYE1Q8NFV5 336 aaPredicted RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 VN1R2Q8NFZ6 395 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 CTCFLQ8NI51 663 aaPredicted RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 TRAPPC12Q8WVT3 735 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 SUSD6Q92537 303 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 SNX27Q96L92 541 aa13.5□□□□□ -0.25
CNOT4-208ENST00000465721 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
CNOT4-208ENST00000465721 M0QZ92 97 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 MGEA5O60502 916 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PDE4AP27815 886 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 KIF5BP33176 963 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PLCB4Q15147 1175 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PKN1Q16512 942 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 SUGP1Q8IWZ8 645 aaKnown RBP13.49□□□□□ -0.25
CNOT4-208ENST00000465721 ASIC4Q96FT7 647 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PRRX2Q99811 253 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 CELF4Q9BZC1 486 aaKnown RBP13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PSTPIP2Q9H939 334 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 HCSTQ9UBK5 93 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 PCDHA2Q9Y5H9 948 aa13.49□□□□□ -0.25
CNOT4-208ENST00000465721 ZNF292O60281 2723 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 ATF7P17544 494 aaPredicted RBP13.48□□□□□ -0.25
CNOT4-208ENST00000465721 CHMLP26374 656 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 SARSP49591 514 aaKnown RBP13.48□□□□□ -0.25
CNOT4-208ENST00000465721 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
CNOT4-208ENST00000465721 UBE3AQ05086 875 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 SIGLEC14Q08ET2 396 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
CNOT4-208ENST00000465721 DUSP6Q16828 381 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 CMTR1Q8N1G2 835 aaKnown RBP13.48□□□□□ -0.25
CNOT4-208ENST00000465721 LZTS2Q9BRK4 669 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 TLE6Q9H808 572 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 TLR9Q9NR96 1032 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
CNOT4-208ENST00000465721 C2orf16Q68DN1 1984 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 CACNA1AO00555 2505 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 NFASCO94856 1347 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
CNOT4-208ENST00000465721 FSCN2O14926 492 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 MAFGO15525 162 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 SGSM2O43147 1006 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 RXRAP19793 462 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 ACTR2P61160 394 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 KRT76Q01546 638 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 MTHFD1LQ6UB35 978 aa13.47□□□□□ -0.25
CNOT4-208ENST00000465721 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms