RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 HMGB1P09429 215 aaKnown RBP25.96■■□□□ 1.75
USP42-205ENST00000465073 ZNF76P36508 570 aa25.96■■□□□ 1.75
USP42-205ENST00000465073 ADCK5Q3MIX3 580 aa25.96■■□□□ 1.75
USP42-205ENST00000465073 CENPQQ7L2Z9 268 aaPredicted RBP25.96■■□□□ 1.75
USP42-205ENST00000465073 PLVAPQ9BX97 442 aa25.96■■□□□ 1.75
USP42-205ENST00000465073 CELF4Q9BZC1 486 aaKnown RBP25.96■■□□□ 1.75
USP42-205ENST00000465073 FAM217BQ9NTX9 383 aaPredicted RBP25.96■■□□□ 1.75
USP42-205ENST00000465073 TMEM260Q9NX78 707 aa25.96■■□□□ 1.75
USP42-205ENST00000465073 FAM50BQ9Y247 325 aa25.96■■□□□ 1.75
USP42-205ENST00000465073 RALGAPA2Q2PPJ7 1873 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 TTC3P53804 2025 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 KLF18A0A0U1RQI7 1052 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 SMIM35A0A1B0GVV1 85 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 GRM6O15303 877 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 CLK2P49760 499 aaKnown RBP25.95■■□□□ 1.74
USP42-205ENST00000465073 EP400NLQ6ZTU2 488 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 RTN4RL1Q86UN2 441 aaPredicted RBP25.95■■□□□ 1.74
USP42-205ENST00000465073 TRAPPC12Q8WVT3 735 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 LINC01599Q8WXQ3 324 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 PADI3Q9ULW8 664 aa25.95■■□□□ 1.74
USP42-205ENST00000465073 IGSF9BQ9UPX0 1349 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 IGKV6D-21A0A0A0MT36 114 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 SSTR3P32745 418 aaPredicted RBP25.94■■□□□ 1.74
USP42-205ENST00000465073 PLA2G5P39877 138 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 FAM43BQ6ZT52 329 aaPredicted RBP25.94■■□□□ 1.74
USP42-205ENST00000465073 NPAS4Q8IUM7 802 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 CRIPAKQ8N1N5 446 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 NLRC5Q86WI3 1866 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 KDM3AQ9Y4C1 1321 aa25.94■■□□□ 1.74
USP42-205ENST00000465073 CDC27P30260 824 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 KRT76Q01546 638 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 TMEM62Q0P6H9 643 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 PAK2Q13177 524 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 FAM160B1Q5W0V3 765 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 MTHFD1LQ6UB35 978 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 CMTR2Q8IYT2 770 aaKnown RBP25.93■■□□□ 1.74
USP42-205ENST00000465073 FAM122AQ96E09 287 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 CLDND1Q9NY35 253 aa25.93■■□□□ 1.74
USP42-205ENST00000465073 ARIH1Q9Y4X5 557 aaPredicted RBP25.93■■□□□ 1.74
USP42-205ENST00000465073 CCDC196A0A1B0GTZ2 297 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 HBP1O60381 514 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 CDC45O75419 566 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 CCNE2O96020 404 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 STAG3L1P0CL83 205 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 ABHD15Q6UXT9 468 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 SKAP1Q86WV1 359 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 MYO7AQ13402 2215 aa25.92■■□□□ 1.74
USP42-205ENST00000465073 BACH1O14867 736 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 KLRC1P26715 233 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 FGD1P98174 961 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 PFKFB3Q16875 520 aaPredicted RBP25.91■■□□□ 1.74
USP42-205ENST00000465073 NAALADL2Q58DX5 795 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 MCTP2Q6DN12 878 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 PLA2G4DQ86XP0 818 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 C11orf16Q9NQ32 467 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 NAP1L2Q9ULW6 460 aaPredicted RBP25.91■■□□□ 1.74
USP42-205ENST00000465073 HCN4Q9Y3Q4 1203 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 FAM86B1E9PN63 330 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 MMP1P03956 469 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 CYP3A4P08684 503 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 FAM86B2P0C5J1 330 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 CTC1Q2NKJ3 1217 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 JAKMIP3Q5VZ66 844 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 ATP8B4Q8TF62 1192 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 P2RX5Q93086 422 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 PRKAG3Q9UGI9 489 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 PLAGL2Q9UPG8 496 aa25.91■■□□□ 1.74
USP42-205ENST00000465073 MRPL42Q9Y6G3 142 aaKnown RBP25.91■■□□□ 1.74
USP42-205ENST00000465073 DDX39AO00148 427 aaKnown RBP25.9■■□□□ 1.74
USP42-205ENST00000465073 SCG2P13521 617 aa25.9■■□□□ 1.74
USP42-205ENST00000465073 ADD1P35611 737 aaKnown RBP25.9■■□□□ 1.74
USP42-205ENST00000465073 HYAL1Q12794 435 aa25.9■■□□□ 1.74
USP42-205ENST00000465073 MIS18BP1Q6P0N0 1132 aa25.9■■□□□ 1.74
USP42-205ENST00000465073 CRYGNQ8WXF5 182 aa25.9■■□□□ 1.74
USP42-205ENST00000465073 COL1A2P08123 1366 aa25.89■■□□□ 1.74
USP42-205ENST00000465073 ESYT2A0FGR8 921 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 IPO5O00410 1097 aaKnown RBP25.89■■□□□ 1.73
USP42-205ENST00000465073 DHX15O43143 795 aaKnown RBP25.89■■□□□ 1.73
USP42-205ENST00000465073 ALADP13716 330 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 LTBRP36941 435 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 METAP2P50579 478 aaKnown RBP eCLIP25.89■■□□□ 1.73
USP42-205ENST00000465073 ZNF484Q5JVG2 852 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 PDXDC2PQ6P474 469 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 ZMYND12Q9H0C1 365 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 ALG13Q9NP73 1137 aaKnown RBP25.89■■□□□ 1.73
USP42-205ENST00000465073 ZNF302Q9NR11 478 aa25.89■■□□□ 1.73
USP42-205ENST00000465073 IGLV3-22A0A075B6J6 115 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 FAM86C2PA6NEL3 165 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 CCDC60Q8IWA6 550 aaPredicted RBP25.88■■□□□ 1.73
USP42-205ENST00000465073 KIAA0319LQ8IZA0 1049 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 CCDC12Q8WUD4 166 aaPredicted RBP25.88■■□□□ 1.73
USP42-205ENST00000465073 TMX1Q9H3N1 280 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 C6orf50Q9HD87 102 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 LRFN2Q9ULH4 789 aa25.88■■□□□ 1.73
USP42-205ENST00000465073 NFX1Q12986 1120 aaKnown RBP25.87■■□□□ 1.73
USP42-205ENST00000465073 TMEM266Q2M3C6 531 aa25.87■■□□□ 1.73
USP42-205ENST00000465073 ODR4Q5SWX8 454 aa25.87■■□□□ 1.73
USP42-205ENST00000465073 SWSAP1Q6NVH7 229 aa25.87■■□□□ 1.73
USP42-205ENST00000465073 KCNB2Q92953 911 aa25.87■■□□□ 1.73
USP42-205ENST00000465073 ZNF577Q9BSK1 485 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms