RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 N4BP2L2Q92802 583 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CYFIP2Q96F07 1278 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 RNPC3Q96LT9 517 aaKnown RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 FAM129AQ9BZQ8 928 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 LACRTQ9GZZ8 138 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 RAB17Q9H0T7 212 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 ARMT1Q9H993 441 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 EPB41L4AQ9HCS5 686 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 SLC40A1Q9NP59 571 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 SEC31BQ9NQW1 1179 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CEP72Q9P209 647 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 DUOX1Q9NRD9 1551 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CNTNAP5Q8WYK1 1306 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 A0A0U1RQJ8 604 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ERVV-1B6SEH8 477 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ZNF185O15231 689 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 CYP27B1O15528 508 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 TRAPPC3O43617 180 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 MOCS3O95396 460 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 FGRP09769 529 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 FGFR2P21802 821 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 MCM7P33993 719 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 EIF4A3P38919 411 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 MATR3P43243 847 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 SCTRP47872 440 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 CLNS1AP54105 237 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ASIC1P78348 528 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 KRT76Q01546 638 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ITGB3BPQ13352 177 aaPredicted RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 HLTFQ14527 1009 aaKnown RBP eCLIP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 RPS6KA1Q15418 735 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 NAB2Q15742 525 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 SKIDA1Q1XH10 827 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 TMEM266Q2M3C6 531 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 LRCH2Q5VUJ6 765 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 PDXDC1Q6P996 788 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 CABP7Q86V35 215 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 GUF1Q8N442 669 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ENAHQ8N8S7 591 aaPredicted RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC197Q8NCU1 140 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 IFT81Q8WYA0 676 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ARL8AQ96BM9 186 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 IFT74Q96LB3 600 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 CEP63Q96MT8 703 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 GDAP1L1Q96MZ0 367 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 RUNDC3BQ96NL0 473 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 NAP1L4Q99733 375 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 TRIM6Q9C030 488 aaPredicted RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 NDST4Q9H3R1 872 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 ZNF287Q9HBT7 754 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 EPB41L5Q9HCM4 733 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 PARP2Q9UGN5 583 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 DMGDHQ9UI17 866 aaKnown RBP7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 GDAQ9Y2T3 454 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 DAAM1Q9Y4D1 1078 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 PCDHGC5Q9Y5F6 944 aa7.87□□□□□ -1.15
CLSTN1-204ENST00000464286 DCCP43146 1447 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 A0A1W2PRU2 124 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 MINDY4BA8MYZ0 360 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ANKRD65E5RJM6 399 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 hCG_1984214I3L0E3 225 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 RNF225M0QZC1 329 aaPredicted RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 PGRMC1O00264 195 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 LIN7AO14910 233 aaPredicted RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ASAP2O43150 1006 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 FLOT1O75955 427 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 GFPT2O94808 682 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 A1BGP04217 495 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 OR52Z1P0C646 297 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 MYBL2P10244 700 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 HSPA6P17066 643 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CYP7A1P22680 504 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 GNA11P29992 359 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ATP5DP30049 168 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 PDE6BP35913 854 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 IGHMBP2P38935 993 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 PHKA1P46020 1223 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ICA1Q05084 483 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 TROAPQ12815 778 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 IRF5Q13568 498 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 TDRD12Q587J7 1177 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ANKRD20A8PQ5CZ79 823 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CENPPQ6IPU0 288 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 NFRKBQ6P4R8 1299 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 UNC13DQ70J99 1090 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 RRAGAQ7L523 313 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 GSPT2Q8IYD1 628 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 FUKQ8N0W3 1084 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 VWA5B2Q8N398 1253 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC82Q8N4S0 544 aa7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ZNF713Q8N859 430 aaPredicted RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 TSEN2Q8NCE0 465 aaKnown RBP7.86□□□□□ -1.15
CLSTN1-204ENST00000464286 ACTRT1Q8TDG2 376 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms