RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SCG2P13521 617 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 DNAJB1P25685 340 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 MRE11P49959 708 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 IGBP1P78318 339 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 TMTC3Q6ZXV5 915 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 PLPPR4Q7Z2D5 763 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 RNF135Q8IUD6 432 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 CMTR1Q8N1G2 835 aaKnown RBP19.79■□□□□ 0.76
HMGN1-210ENST00000464078 SMRP1Q8NCR6 262 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 SPPL3Q8TCT6 385 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 MFSD14AQ96MC6 490 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 PADI3Q9ULW8 664 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 PCDHA6Q9UN73 950 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 PCDHA8Q9Y5H6 950 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 PLXNA4Q9HCM2 1894 aa19.79■□□□□ 0.76
HMGN1-210ENST00000464078 STXBP3O00186 592 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 NDUFV1P49821 464 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 COASYQ13057 564 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 PAK2Q13177 524 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 NFXL1Q6ZNB6 911 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 ZBTB10Q96DT7 871 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 IGFLR1Q9H665 355 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 CLEC1BQ9P126 229 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 TRPC6Q9Y210 931 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 CACNA1HO95180 2353 aa19.78■□□□□ 0.76
HMGN1-210ENST00000464078 SMIM35A0A1B0GVV1 85 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 SLC26A2P50443 739 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 PLCB4Q15147 1175 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 NME8Q8N427 588 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 MXRA8Q9BRK3 442 aa19.77■□□□□ 0.76
HMGN1-210ENST00000464078 CELF4Q9BZC1 486 aaKnown RBP19.77■□□□□ 0.76
HMGN1-210ENST00000464078 FNDC1Q4ZHG4 1894 aaPredicted RBP19.77■□□□□ 0.76
HMGN1-210ENST00000464078 RXRAP19793 462 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 ACTR2P61160 394 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 TMEM62Q0P6H9 643 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 HEATR3Q7Z4Q2 680 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 BMP8AQ7Z5Y6 402 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 ADGRD2Q7Z7M1 963 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 FANCBQ8NB91 859 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 EDAQ92838 391 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 SDF4Q9BRK5 362 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 TMX1Q9H3N1 280 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 SLC12A7Q9Y666 1083 aa19.76■□□□□ 0.75
HMGN1-210ENST00000464078 hCG_1642624A0A1W2PR95 340 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 CSPG5O95196 566 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 GLP2RO95838 553 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 SARSP49591 514 aaKnown RBP19.75■□□□□ 0.75
HMGN1-210ENST00000464078 STAT5BP51692 787 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 KRT76Q01546 638 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 UBE3AQ05086 875 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 COL9A3Q14050 684 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-210ENST00000464078 CBX2Q14781 532 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-210ENST00000464078 PAN2Q504Q3 1202 aaKnown RBP19.75■□□□□ 0.75
HMGN1-210ENST00000464078 CEP55Q53EZ4 464 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 PPP1R18Q6NYC8 613 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 SGMS1Q86VZ5 419 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 TRAPPC12Q8WVT3 735 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 POF1BQ8WVV4 589 aa19.75■□□□□ 0.75
HMGN1-210ENST00000464078 IGKV6D-21A0A0A0MT36 114 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 FSD2A1L4K1 749 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 LOC730098B7Z3J9 87 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 ATG7O95352 703 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 FOSP01100 380 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-210ENST00000464078 NRIP1P48552 1158 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 ITGB3BPQ13352 177 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-210ENST00000464078 MTHFD1LQ6UB35 978 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 CYP2W1Q8TAV3 490 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 LSG1Q9H089 658 aaKnown RBP19.74■□□□□ 0.75
HMGN1-210ENST00000464078 RIC8AQ9NPQ8 531 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-210ENST00000464078 CNTNAP5Q8WYK1 1306 aa19.74■□□□□ 0.75
HMGN1-210ENST00000464078 COL1A2P08123 1366 aa19.73■□□□□ 0.75
HMGN1-210ENST00000464078 GATMP50440 423 aa19.73■□□□□ 0.75
HMGN1-210ENST00000464078 WWC2Q6AWC2 1192 aa19.73■□□□□ 0.75
HMGN1-210ENST00000464078 AGO4Q9HCK5 861 aaKnown RBP19.73■□□□□ 0.75
HMGN1-210ENST00000464078 ERVK-5Q9HDB9 667 aa19.73■□□□□ 0.75
HMGN1-210ENST00000464078 LRFN2Q9ULH4 789 aa19.73■□□□□ 0.75
HMGN1-210ENST00000464078 USP15Q9Y4E8 981 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-210ENST00000464078 hCG_1984214I3L0E3 225 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 MEIS1O00470 390 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 SLC27A2O14975 620 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 ARP10275 920 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 SREBF1P36956 1147 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 PKN1Q16512 942 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 TYW1BQ6NUM6 668 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 TRIM67Q6ZTA4 783 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 MICU3Q86XE3 530 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 CCDC82Q8N4S0 544 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 ZNF713Q8N859 430 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-210ENST00000464078 ATP8B4Q8TF62 1192 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 C1orf112Q9NSG2 853 aa19.72■□□□□ 0.75
HMGN1-210ENST00000464078 BARX2Q9UMQ3 279 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-210ENST00000464078 KMT2EQ8IZD2 1858 aa19.71■□□□□ 0.75
HMGN1-210ENST00000464078 HBP1O60381 514 aa19.71■□□□□ 0.75
HMGN1-210ENST00000464078 MGEA5O60502 916 aa19.71■□□□□ 0.75
HMGN1-210ENST00000464078 CCNE2O96020 404 aa19.71■□□□□ 0.75
HMGN1-210ENST00000464078 ATF7P17544 494 aaPredicted RBP19.71■□□□□ 0.75
HMGN1-210ENST00000464078 NAPAP54920 295 aa19.71■□□□□ 0.75
HMGN1-210ENST00000464078 NIPA1Q7RTP0 329 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms