RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 PCDHA2Q9Y5H9 948 aa14.04□□□□□ -0.16
RPA3-206ENST00000463632 CNTNAP5Q8WYK1 1306 aa14.04□□□□□ -0.16
RPA3-206ENST00000463632 PPFIA3O75145 1194 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 SCG2P13521 617 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 ALADP13716 330 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 KLRC1P26715 233 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 KRT32Q14532 448 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 MIS18BP1Q6P0N0 1132 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 NPAS4Q8IUM7 802 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 NEK9Q8TD19 979 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 MICAL1Q8TDZ2 1067 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 GLT8D2Q9H1C3 349 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
RPA3-206ENST00000463632 MYH7BA7E2Y1 1941 aa14.02□□□□□ -0.16
RPA3-206ENST00000463632 NFASCO94856 1347 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 DENND3A2RUS2 1198 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 C5orf67F2Z3F1 127 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 PI4K2BG5E9Z4 385 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 STXBP3O00186 592 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 HBP1O60381 514 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 GPR37L1O60883 481 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 DGKIO75912 1065 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 NDUFV1P49821 464 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 METAP2P50579 478 aaKnown RBP eCLIP14.02□□□□□ -0.17
RPA3-206ENST00000463632 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.17
RPA3-206ENST00000463632 HYAL1Q12794 435 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 ITGB3BPQ13352 177 aaPredicted RBP14.02□□□□□ -0.17
RPA3-206ENST00000463632 AP3B2Q13367 1082 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 SWSAP1Q6NVH7 229 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 MTHFD1LQ6UB35 978 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 PLPPR4Q7Z2D5 763 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 BARHL2Q9NY43 387 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 SAMM50Q9Y512 469 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
RPA3-206ENST00000463632 MRPL42Q9Y6G3 142 aaKnown RBP14.02□□□□□ -0.17
RPA3-206ENST00000463632 SMIM35A0A1B0GVV1 85 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 hCG_1984214I3L0E3 225 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 SREBF1P36956 1147 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 EXOSC10Q01780 885 aaKnown RBP14.01□□□□□ -0.17
RPA3-206ENST00000463632 ADCK5Q3MIX3 580 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 BMP2KLQ5H9B9 411 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 CMTR2Q8IYT2 770 aaKnown RBP14.01□□□□□ -0.17
RPA3-206ENST00000463632 NME8Q8N427 588 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 METTL13Q8N6R0 699 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 ZNF713Q8N859 430 aaPredicted RBP14.01□□□□□ -0.17
RPA3-206ENST00000463632 LINC01599Q8WXQ3 324 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 ZNF577Q9BSK1 485 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 PLVAPQ9BX97 442 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 UPF3BQ9BZI7 483 aaKnown RBP14.01□□□□□ -0.17
RPA3-206ENST00000463632 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 PLAGL2Q9UPG8 496 aa14.01□□□□□ -0.17
RPA3-206ENST00000463632 COL4A4P53420 1690 aaPredicted RBP14.01□□□□□ -0.17
RPA3-206ENST00000463632 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
RPA3-206ENST00000463632 TBKBP1A7MCY6 615 aa14□□□□□ -0.17
RPA3-206ENST00000463632 MEIS1O00470 390 aa14□□□□□ -0.17
RPA3-206ENST00000463632 DCXO43602 365 aa14□□□□□ -0.17
RPA3-206ENST00000463632 CDC45O75419 566 aa14□□□□□ -0.17
RPA3-206ENST00000463632 RPS6KA5O75582 802 aa14□□□□□ -0.17
RPA3-206ENST00000463632 HMGB1P09429 215 aaKnown RBP14□□□□□ -0.17
RPA3-206ENST00000463632 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
RPA3-206ENST00000463632 GATMP50440 423 aa14□□□□□ -0.17
RPA3-206ENST00000463632 SLC26A2P50443 739 aa14□□□□□ -0.17
RPA3-206ENST00000463632 APOBRQ0VD83 1088 aa14□□□□□ -0.17
RPA3-206ENST00000463632 ODR4Q5SWX8 454 aa14□□□□□ -0.17
RPA3-206ENST00000463632 RBM23Q86U06 439 aaKnown RBP14□□□□□ -0.17
RPA3-206ENST00000463632 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
RPA3-206ENST00000463632 RASEFQ8IZ41 740 aa14□□□□□ -0.17
RPA3-206ENST00000463632 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
RPA3-206ENST00000463632 ATP8B4Q8TF62 1192 aa14□□□□□ -0.17
RPA3-206ENST00000463632 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
RPA3-206ENST00000463632 ZNF689Q96CS4 500 aaPredicted RBP14□□□□□ -0.17
RPA3-206ENST00000463632 C6orf50Q9HD87 102 aa14□□□□□ -0.17
RPA3-206ENST00000463632 SQORQ9Y6N5 450 aa14□□□□□ -0.17
RPA3-206ENST00000463632 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 IPO5O00410 1097 aaKnown RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 CCNE2O96020 404 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 MMP1P03956 469 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 CPA1P15085 419 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 CDC27P30260 824 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 ADD1P35611 737 aaKnown RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 ZNF484Q5JVG2 852 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 Q6ZUG5 572 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 CENPQQ7L2Z9 268 aaPredicted RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 ADHFE1Q8IWW8 467 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 CCDC12Q8WUD4 166 aaPredicted RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 JAKMIP1Q96N16 626 aaKnown RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 SCLT1Q96NL6 688 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 POP1Q99575 1024 aaKnown RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 ADAM2Q99965 735 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 AAASQ9NRG9 546 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
RPA3-206ENST00000463632 CD207Q9UJ71 328 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 PCDHB12Q9Y5F1 795 aa13.99□□□□□ -0.17
RPA3-206ENST00000463632 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
RPA3-206ENST00000463632 GPR182O15218 404 aa13.98□□□□□ -0.17
RPA3-206ENST00000463632 LINC01565O15544 149 aa13.98□□□□□ -0.17
RPA3-206ENST00000463632 ITGB1P05556 798 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms