RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 SGMS1Q86VZ5 419 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 NPAS4Q8IUM7 802 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 ADHFE1Q8IWW8 467 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
CMSS1-202ENST00000463526 CELF4Q9BZC1 486 aaKnown RBP17.48■□□□□ 0.39
CMSS1-202ENST00000463526 AGO4Q9HCK5 861 aaKnown RBP17.48■□□□□ 0.39
CMSS1-202ENST00000463526 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 LRFN2Q9ULH4 789 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 PCDHA2Q9Y5H9 948 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 COL4A6Q14031 1691 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 NLRC5Q86WI3 1866 aa17.48■□□□□ 0.39
CMSS1-202ENST00000463526 SMCO2A6NFE2 343 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 BACH1O14867 736 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 MBTPS2O43462 519 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 MMP1P03956 469 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 ITGB1P05556 798 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 STAG3L1P0CL83 205 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 SCG2P13521 617 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 KRT76Q01546 638 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 CAMK1Q14012 370 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 RTN1Q16799 776 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 CTC1Q2NKJ3 1217 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 APOA5Q6Q788 366 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 MTHFD1LQ6UB35 978 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 CMTR2Q8IYT2 770 aaKnown RBP17.47■□□□□ 0.39
CMSS1-202ENST00000463526 KLHL23Q8NBE8 558 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 PLVAPQ9BX97 442 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 FTHL17Q9BXU8 183 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 RBM28Q9NW13 759 aaKnown RBP17.47■□□□□ 0.39
CMSS1-202ENST00000463526 PRKAG3Q9UGI9 489 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 NAP1L2Q9ULW6 460 aaPredicted RBP17.47■□□□□ 0.39
CMSS1-202ENST00000463526 TTC3P53804 2025 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 NFASCO94856 1347 aa17.47■□□□□ 0.39
CMSS1-202ENST00000463526 ZBTB43O43298 467 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 TBX10O75333 385 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
CMSS1-202ENST00000463526 RPLP2P05387 115 aaKnown RBP17.46■□□□□ 0.39
CMSS1-202ENST00000463526 DNAJB1P25685 340 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 KLRC1P26715 233 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 IRS1P35568 1242 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 TRMT1LQ7Z2T5 733 aaKnown RBP17.46■□□□□ 0.39
CMSS1-202ENST00000463526 SPPL3Q8TCT6 385 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 PPP1R16BQ96T49 567 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 CD207Q9UJ71 328 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 SQORQ9Y6N5 450 aa17.46■□□□□ 0.39
CMSS1-202ENST00000463526 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.38
CMSS1-202ENST00000463526 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 GOLGA8AA7E2F4 631 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 STXBP3O00186 592 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 MEIS1O00470 390 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 CCNE2O96020 404 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 NDUFV1P49821 464 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 ADAM15Q13444 863 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
CMSS1-202ENST00000463526 SPOUT1Q5T280 376 aaKnown RBP17.45■□□□□ 0.38
CMSS1-202ENST00000463526 RNF20Q5VTR2 975 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 ADGRD2Q7Z7M1 963 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 RBM23Q86U06 439 aaKnown RBP17.45■□□□□ 0.38
CMSS1-202ENST00000463526 CDHR5Q9HBB8 845 aa17.45■□□□□ 0.38
CMSS1-202ENST00000463526 RALGAPA2Q2PPJ7 1873 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 ATG7O95352 703 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
CMSS1-202ENST00000463526 FUT2Q10981 343 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 SMAD4Q13485 552 aaKnown RBP17.44■□□□□ 0.38
CMSS1-202ENST00000463526 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 PPP1R18Q6NYC8 613 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 CRIPAKQ8N1N5 446 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 NME8Q8N427 588 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 POF1BQ8WVV4 589 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 P2RX5Q93086 422 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 PPP2R3CQ969Q6 453 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
CMSS1-202ENST00000463526 NOC2LQ9Y3T9 749 aaKnown RBP17.44■□□□□ 0.38
CMSS1-202ENST00000463526 PCDHB7Q9Y5E2 793 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
CMSS1-202ENST00000463526 MUC6Q6W4X9 2439 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 KLF18A0A0U1RQI7 1052 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 HBP1O60381 514 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 MGEA5O60502 916 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 RPS6KA5O75582 802 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 SREBF1P36956 1147 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 NRIP1P48552 1158 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 SWSAP1Q6NVH7 229 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 ABHD15Q6UXT9 468 aa17.43■□□□□ 0.38
CMSS1-202ENST00000463526 DHX32Q7L7V1 743 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms