RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 OSBPL7Q9BZF2 842 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 NCOA5Q9HCD5 579 aaKnown RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 PDRG1Q9NUG6 133 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 THEGQ9P2T0 379 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 TRPC6Q9Y210 931 aa8.27□□□□□ -1.09
PTPRF-210ENST00000463041 TCF20Q9UGU0 1960 aaKnown RBP8.27□□□□□ -1.09
PTPRF-210ENST00000463041 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 LINC01553A4QN01 128 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 EPOPA6NHQ4 379 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 M0QZ92 97 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 ADAMTS3O15072 1205 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 UPP2O95045 317 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 DEXIO95424 95 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 CCNE2O96020 404 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PSAPP07602 524 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 GHRP10912 638 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 KLRC1P26715 233 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 ANAPC15P60006 121 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 MRPS6P82932 125 aaKnown RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 KRT76Q01546 638 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 GRB10Q13322 594 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 LPIN1Q14693 890 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 AAK1Q2M2I8 961 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PRR16Q569H4 304 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 FBXO47Q5MNV8 452 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PDXDC2PQ6P474 469 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 MTHFD1LQ6UB35 978 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 TSHZ1Q6ZSZ6 1077 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 SP7Q8TDD2 431 aaPredicted RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 ATP8B4Q8TF62 1192 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 FTHL17Q9BXU8 183 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 CELF4Q9BZC1 486 aaKnown RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 UPF3BQ9BZI7 483 aaKnown RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 SUGCTQ9HAC7 445 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PRDM6Q9NQX0 595 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF302Q9NR11 478 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 VPS54Q9P1Q0 977 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 TCEAL9Q9UHQ7 104 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 COG5Q9UP83 839 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 PCDHA10Q9Y5I2 948 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 MAFBQ9Y5Q3 323 aaPredicted RBP8.26□□□□□ -1.09
PTPRF-210ENST00000463041 CDY2AQ9Y6F7 541 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 KDM3AQ9Y4C1 1321 aa8.26□□□□□ -1.09
PTPRF-210ENST00000463041 COL1A2P08123 1366 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 SIP14410 1827 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 CYP3A7-CYP3A51PA0A087WV96 503 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 DDX39AO00148 427 aaKnown RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 EDIL3O43854 480 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 LPXNO60711 386 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 CDKL5O76039 1030 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 ATP4AP20648 1035 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 CYP3A7P24462 503 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 CCDC60Q8IWA6 550 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 CKAP2LQ8IYA6 745 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 KIAA0319LQ8IZA0 1049 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 BLIDQ8IZY5 108 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 ZNF710Q8N1W2 664 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 MICALL1Q8N3F8 863 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 BBXQ8WY36 941 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 IL17RAQ96F46 866 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 YME1L1Q96TA2 773 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 RIT2Q99578 217 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 FAM49AQ9H0Q0 323 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 SLKQ9H2G2 1235 aaPredicted RBP8.25□□□□□ -1.09
PTPRF-210ENST00000463041 NRBP2Q9NSY0 501 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 TRPV2Q9Y5S1 764 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
PTPRF-210ENST00000463041 BDP1A6H8Y1 2624 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 M0R2N6 131 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 MSH4O15457 936 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 MAGEB2O15479 319 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 PFKFB2O60825 505 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 PPFIA3O75145 1194 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 RB1P06400 928 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 XBP1P17861 261 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 SFNP31947 248 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 STK3Q13188 491 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
PTPRF-210ENST00000463041 Q4G0T1 1027 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 MOXD1Q6UVY6 613 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 SPRED2Q7Z698 418 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 RTN4RL1Q86UN2 441 aaPredicted RBP8.24□□□□□ -1.09
PTPRF-210ENST00000463041 FIBCD1Q8N539 461 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 DAGLBQ8NCG7 672 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 IL27Q8NEV9 243 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 FBXO22Q8NEZ5 403 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 RDM1Q8NG50 284 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 TBCKQ8TEA7 893 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 TRAPPC12Q8WVT3 735 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 LENG9Q96B70 501 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 FAM167AQ96KS9 214 aa8.24□□□□□ -1.09
PTPRF-210ENST00000463041 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms