RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 GJB7Q6PEY0 223 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-208ENST00000463007 ZFPM1Q8IX07 1006 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 NEUROG2Q9H2A3 272 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 CXorf56Q9H5V9 222 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 HAUS2Q9NVX0 235 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 FBXL5Q9UKA1 691 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-208ENST00000463007 ATP8A1Q9Y2Q0 1164 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
HDAC4-208ENST00000463007 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 OPLAHO14841 1288 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 HSD17B3P37058 310 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 PPP4R3AQ6IN85 833 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 ZSCAN29Q8IWY8 852 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 GIMAP7Q8NHV1 300 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 CHORDC1Q9UHD1 332 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 KIAA1024Q9UPX6 916 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 ATAD5Q96QE3 1844 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 KRIT1O00522 736 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 BUB1BO60566 1050 aaPredicted RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 USP8P40818 1118 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 MAGOHP61326 146 aaKnown RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 SELENOSQ9BQE4 189 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 BCAS3Q9H6U6 928 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 KCNQ5Q9NR82 932 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 COL4A3BPQ9Y5P4 624 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
HDAC4-208ENST00000463007 STAT3P40763 770 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 PTK2Q05397 1052 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 MKL1Q969V6 931 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 MASTLQ96GX5 879 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 TRIM51Q9BSJ1 452 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 IKZF4Q9H2S9 585 aa13.59□□□□□ -0.23
HDAC4-208ENST00000463007 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.23
HDAC4-208ENST00000463007 GRID2IPA4D2P6 1211 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 TTI1O43156 1089 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 SART1O43290 800 aaKnown RBP13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ALDH1B1P30837 517 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 SLCO1A2P46721 670 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 IFNAR2P48551 515 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ADCY7P51828 1080 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 TNNC1P63316 161 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ADAM9Q13443 819 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ASIC2Q16515 512 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 SLC30A10Q6XR72 485 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 TAX1BP1Q86VP1 789 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 CRYGNQ8WXF5 182 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 IDI2Q9BXS1 227 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ZC3H12CQ9C0D7 883 aaKnown RBP13.58□□□□□ -0.24
HDAC4-208ENST00000463007 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 NOL4O94818 638 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 CPP00450 1065 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 SCNN1DP51172 638 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
HDAC4-208ENST00000463007 COASYQ13057 564 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 ZNF211Q13398 564 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-208ENST00000463007 PDIA5Q14554 519 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 DACT2Q5SW24 774 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 TTBK2Q6IQ55 1244 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 HAS1Q92839 578 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 KLC4Q9NSK0 619 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 FAM198AQ9UFP1 575 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 PCDHAC2Q9Y5I4 1007 aa13.58□□□□□ -0.24
HDAC4-208ENST00000463007 EIF4E1BA6NMX2 242 aaKnown RBP13.57□□□□□ -0.24
HDAC4-208ENST00000463007 CLIC2O15247 247 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 CRKP46108 304 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 POTEB3A0JP26 581 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 POTECB2RU33 542 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
HDAC4-208ENST00000463007 HMGB2P26583 209 aaKnown RBP13.57□□□□□ -0.24
HDAC4-208ENST00000463007 FKBP3Q00688 224 aaKnown RBP13.57□□□□□ -0.24
HDAC4-208ENST00000463007 GPATCH4Q5T3I0 446 aaKnown RBP13.57□□□□□ -0.24
HDAC4-208ENST00000463007 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 POTEBQ6S5H4 581 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
HDAC4-208ENST00000463007 SUGP1Q8IWZ8 645 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms