RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
HDAC6-213ENST00000462730 A0A1W2PQC6 194 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 ZBTB39O15060 712 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 NR3C2P08235 984 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 RSPH10BP0C881 870 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 OSBPP22059 807 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 DNM2P50570 870 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 MKRN3Q13064 507 aaKnown RBP16.02■□□□□ 0.15
HDAC6-213ENST00000462730 PTPN14Q15678 1187 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 NYAP1Q6ZVC0 841 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 SCFD1Q8WVM8 642 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.15
HDAC6-213ENST00000462730 TXNRD2Q9NNW7 524 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 FBXO40Q9UH90 709 aa16.02■□□□□ 0.15
HDAC6-213ENST00000462730 CCP110O43303 1012 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 MIIPQ5JXC2 388 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 XRRA1Q6P2D8 792 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 CCDC51Q96ER9 411 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 PFASO15067 1338 aa16.01■□□□□ 0.15
HDAC6-213ENST00000462730 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 CASP5P51878 434 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 C1orf186Q6ZWK4 172 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 POLD4Q9HCU8 107 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 TBC1D22BQ9NU19 505 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 COL4A3BPQ9Y5P4 624 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 NKRFO15226 690 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC6-213ENST00000462730 FAM13AO94988 1023 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 GAP43P17677 238 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 ERCC3P19447 782 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 FKBP3Q00688 224 aaKnown RBP16■□□□□ 0.15
HDAC6-213ENST00000462730 TBC1D8BQ0IIM8 1120 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 TAF3Q5VWG9 929 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 INPP4AQ96PE3 977 aaPredicted RBP16■□□□□ 0.15
HDAC6-213ENST00000462730 NAA15Q9BXJ9 866 aaKnown RBP16■□□□□ 0.15
HDAC6-213ENST00000462730 KCTD10Q9H3F6 313 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 RBPJLQ9UBG7 517 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 ASTN1O14525 1302 aa16■□□□□ 0.15
HDAC6-213ENST00000462730 RNF225M0QZC1 329 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-213ENST00000462730 MYBP10242 640 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 CYP2C8P10632 490 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 GTF2A2P52657 109 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 CNTN2Q02246 1040 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 VWA3BQ502W6 1294 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 FKBP15Q5T1M5 1219 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 EPM2AIP1Q7L775 607 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-213ENST00000462730 GPRASP2Q96D09 838 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 CEP63Q96MT8 703 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 R3HDMLQ9H3Y0 253 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 PNMA3Q9UL41 463 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 SAMM50Q9Y512 469 aa15.99■□□□□ 0.15
HDAC6-213ENST00000462730 LRRC37A2A6NM11 1700 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ARHGEF35A5YM69 484 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ATP9AO75110 1047 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 SLC25A27O95847 323 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 P4HBP07237 508 aaKnown RBP15.98■□□□□ 0.15
HDAC6-213ENST00000462730 CETPP11597 493 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 CCL15Q16663 113 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 DNERQ8NFT8 737 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ZNF592Q92610 1267 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 BCAS3Q9H6U6 928 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ZSWIM4Q9H7M6 989 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 MRPL44Q9H9J2 332 aaKnown RBP15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ABHD10Q9NUJ1 306 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 PPP2R2CQ9Y2T4 447 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 TRPM7Q96QT4 1865 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 SFI1A8K8P3 1242 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 ZSCAN12O43309 604 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 RGS20O76081 388 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 PRPF6O94906 941 aaKnown RBP15.98■□□□□ 0.15
HDAC6-213ENST00000462730 KRT9P35527 623 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 KLK7P49862 253 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 MTF1Q14872 753 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 Q3C1V9 767 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 NLRX1Q86UT6 975 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 MYCT1Q8N699 235 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 PCMTD1Q96MG8 357 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-213ENST00000462730 TCEAL9Q9UHQ7 104 aa15.98■□□□□ 0.15
HDAC6-213ENST00000462730 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 KIF2AO00139 706 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-213ENST00000462730 STAM2O75886 525 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 GCNT3O95395 438 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 FECHP22830 423 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 ALDH5A1P51649 535 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-213ENST00000462730 CST9Q5W186 159 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 SMCR8Q8TEV9 937 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-213ENST00000462730 BRI3BPQ8WY22 251 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 ERGIC2Q96RQ1 377 aa15.97■□□□□ 0.15
HDAC6-213ENST00000462730 NDST4Q9H3R1 872 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms