RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 PPP2R2AP63151 447 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 ATP8B2P98198 1209 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 SCRN1Q12765 414 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 SMC5Q8IY18 1101 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 GCC1Q96CN9 775 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 MAP6Q96JE9 813 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 HHIPL1Q96JK4 782 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 FCRL2Q96LA5 508 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 PDGFDQ9GZP0 370 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
UBE4B-204ENST00000462658 LRRFIP2Q9Y608 721 aaKnown RBP9.01□□□□□ -0.97
UBE4B-204ENST00000462658 C2orf71A6NGG8 1288 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 GRM8O00222 908 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 FGF10O15520 208 aaPredicted RBP9□□□□□ -0.97
UBE4B-204ENST00000462658 CYP4F3Q08477 520 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 SSRP1Q08945 709 aaKnown RBP9□□□□□ -0.97
UBE4B-204ENST00000462658 IFRD2Q12894 506 aaPredicted RBP9□□□□□ -0.97
UBE4B-204ENST00000462658 DUSP4Q13115 394 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 GCKRQ14397 625 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 SKAP1Q86WV1 359 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 NAT16Q8N8M0 369 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 NKX2-4Q9H2Z4 354 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 DCTPP1Q9H773 170 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 GPRC5CQ9NQ84 441 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 BACE2Q9Y5Z0 518 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 UTYO14607 1347 aa9□□□□□ -0.97
UBE4B-204ENST00000462658 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
UBE4B-204ENST00000462658 EIF5P55010 431 aaKnown RBP8.99□□□□□ -0.97
UBE4B-204ENST00000462658 TCIRG1Q13488 830 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 CCDC120Q96HB5 630 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 SPATA9Q9BWV2 254 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 SP110Q9HB58 689 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 ARHGEF4Q9NR80 690 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 MAP3K15Q6ZN16 1313 aa8.99□□□□□ -0.97
UBE4B-204ENST00000462658 TAF1LQ8IZX4 1826 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 TJP1Q07157 1748 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 PNMA6EA0A0J9YXQ4 647 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 IQCA1LA6NCM1 817 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 ERVV-1B6SEH8 477 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 PLSCR1O15162 318 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 CAPNS1P04632 268 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 SNRPB2P08579 225 aaKnown RBP8.98□□□□□ -0.97
UBE4B-204ENST00000462658 ECI1P42126 302 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 RGS3P49796 1198 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 SEPHS1P49903 392 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 NUCB1Q02818 461 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 R3HDM1Q15032 1099 aaKnown RBP8.98□□□□□ -0.97
UBE4B-204ENST00000462658 TIGD5Q53EQ6 642 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 ANKRD45Q5TZF3 282 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 FYB2Q5VWT5 728 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 CCDC191Q8NCU4 936 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 PDZD8Q8NEN9 1154 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 SGSM3Q96HU1 749 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 PTCHD1Q96NR3 888 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 ISCA1Q9BUE6 129 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 CYP26B1Q9NR63 512 aa8.98□□□□□ -0.97
UBE4B-204ENST00000462658 CWC25Q9NXE8 425 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-204ENST00000462658 CCNL1Q9UK58 526 aaPredicted RBP8.98□□□□□ -0.97
UBE4B-204ENST00000462658 N4BP2Q86UW6 1770 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 EFEMP2O95967 443 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 HPXP02790 462 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 THBDP07204 575 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 ENDOUP21128 410 aaKnown RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 KCNJ6P48051 423 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 GALK1P51570 392 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 IRAK1P51617 712 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 HSP90AA2PQ14568 343 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 HLFQ16534 295 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 HSP90AB3PQ58FF7 597 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 XP32Q5T750 250 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 YOD1Q5VVQ6 348 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 RCSD1Q6JBY9 416 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 CEP128Q6ZU80 1094 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 PPP1R42Q7Z4L9 355 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 CHD1LQ86WJ1 897 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 LRRC47Q8N1G4 583 aaKnown RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 FLAD1Q8NFF5 587 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 COPS5Q92905 334 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 ZNF669Q96BR6 464 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-204ENST00000462658 MRFAP1L1Q96HT8 127 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 CLEC1BQ9P126 229 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 COL24A1Q17RW2 1714 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 QSER1Q2KHR3 1735 aa8.97□□□□□ -0.97
UBE4B-204ENST00000462658 NOTOA8MTQ0 251 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 SRGAP3O43295 1099 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 ADCY3O60266 1144 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 FAM153BP0C7A2 387 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 HOXC12P31275 282 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 MTX1Q13505 466 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 KIR3DS1Q14943 382 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 TXNRD1Q16881 649 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 ZNF827Q17R98 1081 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 EEF1DP3Q658K8 133 aa8.96□□□□□ -0.98
UBE4B-204ENST00000462658 UBE3BQ7Z3V4 1068 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms