RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PLCB4Q15147 1175 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 CCDC85BQ15834 202 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 JAKMIP3Q5VZ66 844 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ERICH6BQ5W0A0 696 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ABHD15Q6UXT9 468 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 RUFY4Q6ZNE9 571 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 FAM43BQ6ZT52 329 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ZNF274Q96GC6 653 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ASB2Q96Q27 587 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 TGS1Q96RS0 853 aaKnown RBP10.43□□□□□ -0.74
BRCA1-207ENST00000461798 AZI2Q9H6S1 392 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 CERS4Q9HA82 394 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 SH3GLB2Q9NR46 395 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 TBC1D22BQ9NU19 505 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 THEGQ9P2T0 379 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 TUBE1Q9UJT0 475 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 PCDHA2Q9Y5H9 948 aa10.43□□□□□ -0.74
BRCA1-207ENST00000461798 ADAMTS3O15072 1205 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 CCNE2O96020 404 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 MARK3P27448 753 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 AKAP17AQ02040 695 aaKnown RBP10.42□□□□□ -0.74
BRCA1-207ENST00000461798 TOB2Q14106 344 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-207ENST00000461798 SPRED2Q7Z698 418 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 PLA2G4DQ86XP0 818 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 FAM177A1Q8N128 213 aaPredicted RBP10.42□□□□□ -0.74
BRCA1-207ENST00000461798 REXO1Q8N1G1 1221 aaKnown RBP10.42□□□□□ -0.74
BRCA1-207ENST00000461798 NME8Q8N427 588 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 CCDC148Q8NFR7 591 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 BICD2Q8TD16 824 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 DNAJB3Q8WWF6 145 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 PHKBQ93100 1093 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 IFIH1Q9BYX4 1025 aaKnown RBP10.42□□□□□ -0.74
BRCA1-207ENST00000461798 SUGCTQ9HAC7 445 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 CYP46A1Q9Y6A2 500 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 CHD7Q9P2D1 2997 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 GBF1Q92538 1859 aa10.42□□□□□ -0.74
BRCA1-207ENST00000461798 UNC80Q8N2C7 3258 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 KDM3AQ9Y4C1 1321 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 SMIM35A0A1B0GVV1 85 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 IPO5O00410 1097 aaKnown RBP10.41□□□□□ -0.74
BRCA1-207ENST00000461798 ENPP3O14638 875 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 EDIL3O43854 480 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 HBP1O60381 514 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 NEFLP07196 543 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 USP11P51784 963 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 MRPS6P82932 125 aaKnown RBP10.41□□□□□ -0.74
BRCA1-207ENST00000461798 SETQ01105 290 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-207ENST00000461798 LPIN1Q14693 890 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 FBXO47Q5MNV8 452 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 IER5Q5VY09 327 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 FAM117BQ6P1L5 589 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 MYOCDQ8IZQ8 938 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 ATP8B4Q8TF62 1192 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 SAMD11Q96NU1 681 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 COG5Q9UP83 839 aa10.41□□□□□ -0.74
BRCA1-207ENST00000461798 PRRC2BQ5JSZ5 2229 aaKnown RBP10.41□□□□□ -0.74
BRCA1-207ENST00000461798 RBAK-RBAKDNI3L0D1 243 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 GHRP10912 638 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 IGBP1P78318 339 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 CCT2P78371 535 aaKnown RBP10.4□□□□□ -0.74
BRCA1-207ENST00000461798 FAM160B1Q5W0V3 765 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 KRT40Q6A162 431 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 ZNF746Q6NUN9 644 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-207ENST00000461798 MIS18BP1Q6P0N0 1132 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 MTHFD1LQ6UB35 978 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 TSHZ1Q6ZSZ6 1077 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 SMAP1Q8IYB5 467 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-207ENST00000461798 LENG9Q96B70 501 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
BRCA1-207ENST00000461798 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-207ENST00000461798 CDY2AQ9Y6F7 541 aa10.4□□□□□ -0.74
BRCA1-207ENST00000461798 PRUNE2Q8WUY3 3088 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 COL1A2P08123 1366 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 PTPRSQ13332 1948 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 DOCK5Q9H7D0 1870 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 DEXIO95424 95 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 BMP1P13497 986 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 ATP4AP20648 1035 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 KLRC1P26715 233 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 KRT76Q01546 638 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 SSRP1Q08945 709 aaKnown RBP10.39□□□□□ -0.75
BRCA1-207ENST00000461798 AAK1Q2M2I8 961 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 ZNF484Q5JVG2 852 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 SWSAP1Q6NVH7 229 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 RTN4RL1Q86UN2 441 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-207ENST00000461798 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-207ENST00000461798 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 CRIPAKQ8N1N5 446 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 IL17RAQ96F46 866 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 YME1L1Q96TA2 773 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 RIT2Q99578 217 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 C17orf80Q9BSJ5 609 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 FTHL17Q9BXU8 183 aa10.39□□□□□ -0.75
BRCA1-207ENST00000461798 CELF4Q9BZC1 486 aaKnown RBP10.39□□□□□ -0.75
BRCA1-207ENST00000461798 C22orf23Q9BZE7 217 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms