RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 CYP27B1O15528 508 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 MAFKO60675 156 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 GJB6O95452 261 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 TESK1Q15569 626 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 MBNL2Q5VZF2 373 aaKnown RBP5.31□□□□□ -1.56
CCT4-203ENST00000461540 EEPD1Q7L9B9 569 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCT4-203ENST00000461540 ZNF428Q96B54 188 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 BBC3Q96PG8 261 aaPredicted RBP5.31□□□□□ -1.56
CCT4-203ENST00000461540 BRIP1Q9BX63 1249 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 EPB41L1Q9H4G0 881 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 MSL2Q9HCI7 577 aa5.31□□□□□ -1.56
CCT4-203ENST00000461540 PUF60Q9UHX1 559 aaKnown RBP5.31□□□□□ -1.56
CCT4-203ENST00000461540 R3HCC1Q9Y3T6 440 aaKnown RBP5.31□□□□□ -1.56
CCT4-203ENST00000461540 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 CUTAO60888 179 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 IGSF3O75054 1194 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 RPS6KA4O75676 772 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 ONECUT2O95948 504 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 GRIA2P42262 883 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 RRADP55042 308 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 KRTAP10-6P60371 365 aaPredicted RBP5.3□□□□□ -1.56
CCT4-203ENST00000461540 TRIM48Q8IWZ4 208 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 EPN3Q9H201 632 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 SMOC1Q9H4F8 434 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 ZNF408Q9H9D4 720 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 PACSIN3Q9UKS6 424 aa5.3□□□□□ -1.56
CCT4-203ENST00000461540 LOC105371045A0A1W2PR82 267 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 MATN2O00339 956 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 KRIT1O00522 736 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 POLD1P28340 1107 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 PPP2R2AP63151 447 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 SLC35F1Q5T1Q4 408 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 STRIP1Q5VSL9 837 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 MICALCLQ6ZW33 695 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 ADGRE4PQ86SQ3 457 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 KCTD13Q8WZ19 329 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 C1orf159Q96HA4 380 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 JAM3Q9BX67 310 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 NRDE2Q9H7Z3 1164 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 ST7Q9NRC1 585 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
CCT4-203ENST00000461540 A0A1W2PQU0 124 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 PTGS2P35354 604 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 ARID5AQ03989 594 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
CCT4-203ENST00000461540 D2HGDHQ8N465 521 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 TTLL11Q8NHH1 800 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 IER2Q9BTL4 223 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 NPFFR2Q9Y5X5 522 aa5.28□□□□□ -1.56
CCT4-203ENST00000461540 CAPNS1P04632 268 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 SLC25A3Q00325 362 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 GRIN1Q05586 938 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 MAP4K2Q12851 820 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 GRM7Q14831 915 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 USP53Q70EK8 1073 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 SLC6A20Q9NP91 592 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 GPR27Q9NS67 375 aa5.27□□□□□ -1.57
CCT4-203ENST00000461540 SLC27A2O14975 620 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 ARHGAP6O43182 974 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 DLX3O60479 287 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 MSCO60682 206 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 ENO2P09104 434 aaPredicted RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 HMGB1P09429 215 aaKnown RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 FGRP09769 529 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 TCF3P15923 654 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 TOP3AQ13472 1001 aaPredicted RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 NFYCQ13952 458 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 HSP90AA2PQ14568 343 aaPredicted RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 MCF2L2Q86YR7 1114 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 PIP4K2CQ8TBX8 421 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 HNRNPLLQ8WVV9 542 aaKnown RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 HAS1Q92839 578 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 TACO1Q9BSH4 297 aaKnown RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 PHF20Q9BVI0 1012 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 NELFAQ9H3P2 528 aa5.26□□□□□ -1.57
CCT4-203ENST00000461540 PPARGC1AQ9UBK2 798 aaKnown RBP5.26□□□□□ -1.57
CCT4-203ENST00000461540 ESYT3A0FGR9 886 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 COL6A2P12110 1019 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 PFKPQ01813 784 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 PCOLCEQ15113 449 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 CYP4F22Q6NT55 531 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 ANKS3Q6ZW76 656 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 RBM12BQ8IXT5 1001 aaKnown RBP5.25□□□□□ -1.57
CCT4-203ENST00000461540 CELF2-AS1Q8N7Q2 184 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 CLEC4DQ8WXI8 215 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 KCNJ15Q99712 375 aa5.25□□□□□ -1.57
CCT4-203ENST00000461540 PRODHO43272 600 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 IL18BPO95998 194 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 RSPO2Q6UXX9 243 aaPredicted RBP5.24□□□□□ -1.57
CCT4-203ENST00000461540 MRGPREQ86SM8 312 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 VRK3Q8IV63 474 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 DCAF4Q8WV16 495 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 USP35Q9P2H5 1018 aa5.24□□□□□ -1.57
CCT4-203ENST00000461540 HECAQ9UBI9 543 aaPredicted RBP5.24□□□□□ -1.57
CCT4-203ENST00000461540 IQCA1LA6NCM1 817 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms