RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ZNF648Q5T619 568 aaPredicted RBP4.15□□□□□ -1.75
VCL-203ENST00000461383 GPR158Q5T848 1215 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 PAQR3Q6TCH7 311 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 SPOCD1Q6ZMY3 1216 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 NLRX1Q86UT6 975 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 C1orf162Q8NEQ5 155 aaPredicted RBP4.15□□□□□ -1.75
VCL-203ENST00000461383 ABHD4Q8TB40 342 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 JPH3Q8WXH2 748 aaPredicted RBP4.15□□□□□ -1.75
VCL-203ENST00000461383 RTF1Q92541 710 aaKnown RBP4.15□□□□□ -1.75
VCL-203ENST00000461383 DLG3Q92796 817 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 RELTQ969Z4 430 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 FERMT2Q96AC1 680 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 E2F7Q96AV8 911 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 DDX11Q96FC9 970 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 FAXDC2Q96IV6 333 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 CDH19Q9H159 772 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 MS4A5Q9H3V2 200 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 INVSQ9Y283 1065 aa4.15□□□□□ -1.75
VCL-203ENST00000461383 TCRBV5S2A0A599 114 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 UBA6A0AVT1 1052 aaPredicted RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 KLHL33A6NCF5 533 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 FAM90A27PA6NNH2 459 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 NOTOA8MTQ0 251 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 SRGAP3O43295 1099 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 IL33O95760 270 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 TMEM253P0C7T8 217 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 U2AF1L5P0DN76 240 aaPredicted RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 PF4V1P10720 104 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 SDHAP31040 664 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 PDE6BP35913 854 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 AFMP43652 599 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 FNTBP49356 437 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 U2AF1Q01081 240 aaKnown RBP eCLIP4.14□□□□□ -1.75
VCL-203ENST00000461383 TMEM62Q0P6H9 643 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 MESP2Q0VG99 397 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 NR1I3Q14994 352 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 RAB3GAP1Q15042 981 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 MLC1Q15049 377 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.75
VCL-203ENST00000461383 SEC23AQ15436 765 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 TIGD5Q53EQ6 642 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 ADGRF1Q5T601 910 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 EFCAB2Q5VUJ9 269 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 TIGD7Q6NT04 549 aaPredicted RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 ESRP1Q6NXG1 681 aaKnown RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 ESPNLQ6ZVH7 1005 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 C14orf80Q86SX3 495 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 CILP2Q8IUL8 1156 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 PHYKPLQ8IUZ5 450 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 CMIPQ8IY22 773 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 CBARPQ8N350 705 aaPredicted RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 TGFBRAP1Q8WUH2 860 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 ACAP3Q96P50 834 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 GBP4Q96PP9 640 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 CAMKK2Q96RR4 588 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 TUBGCP5Q96RT8 1024 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 RTFDC1Q9BY42 306 aaPredicted RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 SLC13A1Q9BZW2 595 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 ZMAT4Q9H898 229 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 TNFRSF12AQ9NP84 129 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 DNAJC28Q9NX36 388 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 USP36Q9P275 1121 aaKnown RBP4.14□□□□□ -1.75
VCL-203ENST00000461383 ARHGAP28Q9P2N2 729 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 ANKRD6Q9Y2G4 727 aa4.14□□□□□ -1.75
VCL-203ENST00000461383 ST20-MTHFSA0A0A6YYL1 179 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 CCDC194A0A1B0GVG4 234 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 LCHNA4D1U4 455 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 PLIN1O60240 522 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 CAND2O75155 1236 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 RFPL1O75677 317 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 ABLIM3O94929 683 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 C4BPAP04003 597 aaKnown RBP4.13□□□□□ -1.75
VCL-203ENST00000461383 KRT18P05783 430 aaKnown RBP4.13□□□□□ -1.75
VCL-203ENST00000461383 MMEP08473 750 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 RBP3P10745 1247 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 VCAM1P19320 739 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 SDHBP21912 280 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 SLC9A5Q14940 896 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 EPHA7Q15375 998 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 GFOD2Q3B7J2 385 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 INAVAQ3KP66 663 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 PAN2Q504Q3 1202 aaKnown RBP4.13□□□□□ -1.75
VCL-203ENST00000461383 FBLN7Q53RD9 439 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 TTC38Q5R3I4 469 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 FAM102BQ5T8I3 360 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 PRAMEF9Q5VWM5 478 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 SLC4A10Q6U841 1118 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 ARRDC4Q8NCT1 418 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 WDR48Q8TAF3 677 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 CLEC4DQ8WXI8 215 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 ANO3Q9BYT9 981 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 RHOBTB2Q9BYZ6 727 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 RNF32Q9H0A6 362 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 CCM2LQ9NUG4 571 aaPredicted RBP4.13□□□□□ -1.75
VCL-203ENST00000461383 C19orf73Q9NVV2 129 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 CTNND2Q9UQB3 1225 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 GIT1Q9Y2X7 761 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 TELO2Q9Y4R8 837 aa4.13□□□□□ -1.75
VCL-203ENST00000461383 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms