RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 NGEFQ8N5V2 710 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 TSPYL6Q8N831 410 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 C19orf47Q8N9M1 422 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 C8orf58Q8NAV2 365 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 GPATCH3Q96I76 525 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 TM9SF2Q99805 663 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PRDM14Q9GZV8 571 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 MTFR1LQ9H019 292 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PNNQ9H307 717 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 FANCLQ9NW38 375 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 UBR2Q8IWV8 1755 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 N4BP3O15049 544 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 CDC45O75419 566 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 ZNF853P0CG23 659 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 HSPA1AP0DMV8 641 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 HSPA1BP0DMV9 641 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 CYP19A1P11511 503 aaPredicted RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 NME1P15531 152 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 EIF2S2P20042 333 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 GUCY2CP25092 1073 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 VIPR1P32241 457 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 BMP8BP34820 402 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 CRKLP46109 303 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 RTP1P59025 263 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 HTRA3P83110 453 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 GALNT18Q6P9A2 607 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 TTC5Q8N0Z6 440 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 APPBP2Q92624 585 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 SMARCC1Q92922 1105 aaPredicted RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 CNTD2Q9H8S5 307 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 CHST7Q9NS84 486 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 SIRT5Q9NXA8 310 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 SRP68Q9UHB9 627 aaKnown RBP6□□□□□ -1.45
ATPAF1-203ENST00000460928 ZBTB1Q9Y2K1 713 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 IRAK3Q9Y616 596 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 ADCY9O60503 1353 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 HEG1Q9ULI3 1381 aa6□□□□□ -1.45
ATPAF1-203ENST00000460928 PNPLA7Q6ZV29 1317 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 ZNF521Q96K83 1311 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 C4BP0C0L5 1744 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 COL5A3P25940 1745 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 PLEKHG2Q9H7P9 1386 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 ESYT3A0FGR9 886 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 WTIPA6NIX2 430 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 IRS4O14654 1257 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 FKTNO75072 461 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 ZNF205O95201 554 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 MYL6BP14649 208 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 IBSPP21815 317 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 SLC15A2Q16348 729 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 MTERF2Q49AM1 385 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 HSF5Q4G112 596 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 C6orf15Q6UXA7 325 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 ZPBP2Q6X784 338 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 COL23A1Q86Y22 540 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 FAM178BQ8IXR5 827 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 DACT3Q96B18 629 aaPredicted RBP5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 ZCCHC4Q9H5U6 513 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 STK32BQ9NY57 414 aa5.99□□□□□ -1.45
ATPAF1-203ENST00000460928 UBR3Q6ZT12 1888 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 A0A0G2JLL6 359 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 B2RBV5 119 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 RRP9O43818 475 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 TRIM13O60858 407 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 BMP7P18075 431 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 PI3P19957 117 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 IGBP1P78318 339 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 LMOD3Q0VAK6 560 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 LAPTM5Q13571 262 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 INTS3Q68E01 1043 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 G2E3Q7L622 706 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 FILIP1Q7Z7B0 1213 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 SLCO6A1Q86UG4 719 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 HOMER1Q86YM7 354 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 TMEM192Q8IY95 271 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 TAB3Q8N5C8 712 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 RELTQ969Z4 430 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 SLKQ9H2G2 1235 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 IFT57Q9NWB7 429 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 ERVK13-1Q9NX77 482 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 TFCP2L1Q9NZI6 479 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 BCCIPQ9P287 314 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 GPR55Q9Y2T6 319 aaPredicted RBP5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 PCDHB12Q9Y5F1 795 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 SLC12A7Q9Y666 1083 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 TAF6LQ9Y6J9 622 aa5.98□□□□□ -1.45
ATPAF1-203ENST00000460928 PDE4DIPQ5VU43 2346 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 hCG_2014768A0A024R1R8 64 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 A0A1W2PQ45 241 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 A0A1W2PQY0 241 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 PPP1R12AO14974 1030 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 TNRC18O15417 2968 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 MPOP05164 745 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 SNRPA1P09661 255 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 ARL4AP40617 200 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 CTSKP43235 329 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 EPHB3P54753 998 aa5.97□□□□□ -1.45
ATPAF1-203ENST00000460928 GNAI1P63096 354 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms