RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 DDX39AO00148 427 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 IER5Q5VY09 327 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 FAM160B1Q5W0V3 765 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 CCDC60Q8IWA6 550 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 RASGRP4Q8TDF6 673 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 GDPD5Q8WTR4 605 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 C17orf80Q9BSJ5 609 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 FAM49AQ9H0Q0 323 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 VPS54Q9P1Q0 977 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 COL1A2P08123 1366 aa13.41□□□□□ -0.26
SOX2-OT-201ENST00000460739 TTC3P53804 2025 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 TTC28Q96AY4 2481 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 BACH1O14867 736 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 HBP1O60381 514 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 UPP2O95045 317 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 SSRP1Q08945 709 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 ZNF746Q6NUN9 644 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 MIS18BP1Q6P0N0 1132 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 SMAP1Q8IYB5 467 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 NME8Q8N427 588 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 LENG9Q96B70 501 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 YME1L1Q96TA2 773 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 ZNF302Q9NR11 478 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 BDP1A6H8Y1 2624 aa13.4□□□□□ -0.26
SOX2-OT-201ENST00000460739 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 ZBTB42B2RXF5 422 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 ENPP3O14638 875 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 EDIL3O43854 480 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 DEXIO95424 95 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 ATP4AP20648 1035 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 USP11P51784 963 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 NLRP5P59047 1200 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 KRT76Q01546 638 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 AAK1Q2M2I8 961 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 PRR16Q569H4 304 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 SWSAP1Q6NVH7 229 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 FBXO22Q8NEZ5 403 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 UIMC1Q96RL1 719 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 PDRG1Q9NUG6 133 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 COG5Q9UP83 839 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 TRPV2Q9Y5S1 764 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 ATG2AQ2TAZ0 1938 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
SOX2-OT-201ENST00000460739 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 M0QZ92 97 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 CPLX1O14810 134 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 PSAPP07602 524 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 KLRC1P26715 233 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 CD52P31358 61 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 TFF2Q03403 129 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 TMEM62Q0P6H9 643 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 EPC2Q52LR7 807 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 ADAMTS19Q8TE59 1207 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 FTHL17Q9BXU8 183 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 C22orf23Q9BZE7 217 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 RC3H2Q9HBD1 1191 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
SOX2-OT-201ENST00000460739 H3BNC9 293 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 M0R2N6 131 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 MSH4O15457 936 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 BMP1P13497 986 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 ANAPC15P60006 121 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 STK3Q13188 491 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 NPY5RQ15761 445 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 FAM43BQ6ZT52 329 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 TMEM192Q8IY95 271 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 KIAA0319LQ8IZA0 1049 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 DAGLBQ8NCG7 672 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 TBCKQ8TEA7 893 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 LINC01599Q8WXQ3 324 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
SOX2-OT-201ENST00000460739 HLA-CQ95604 372 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms