RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 CLDND1Q9NY35 253 aa11.22□□□□□ -0.61
SYN3-205ENST00000459990 HCSTQ9UBK5 93 aa11.22□□□□□ -0.61
SYN3-205ENST00000459990 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
SYN3-205ENST00000459990 PCDHGC5Q9Y5F6 944 aa11.22□□□□□ -0.61
SYN3-205ENST00000459990 TRPV2Q9Y5S1 764 aa11.22□□□□□ -0.61
SYN3-205ENST00000459990 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 IGLV3-22A0A075B6J6 115 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 IGKV6D-21A0A0A0MT36 114 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 ZBTB42B2RXF5 422 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 FAM86B1E9PN63 330 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 ATG7O95352 703 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 FAM86B2P0C5J1 330 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 CPA1P15085 419 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 ATP4AP20648 1035 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 SSTR3P32745 418 aaPredicted RBP11.21□□□□□ -0.61
SYN3-205ENST00000459990 IRS1P35568 1242 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 SREBF1P36956 1147 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 BTG3Q14201 252 aaPredicted RBP11.21□□□□□ -0.61
SYN3-205ENST00000459990 RTN1Q16799 776 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 TMEM266Q2M3C6 531 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 PAN2Q504Q3 1202 aaKnown RBP11.21□□□□□ -0.61
SYN3-205ENST00000459990 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 CCDC60Q8IWA6 550 aaPredicted RBP11.21□□□□□ -0.61
SYN3-205ENST00000459990 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 FAM122AQ96E09 287 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 ALG13Q9NP73 1137 aaKnown RBP11.21□□□□□ -0.61
SYN3-205ENST00000459990 PADI3Q9ULW8 664 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
SYN3-205ENST00000459990 TECTAO75443 2155 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 RRN3P2A6NIE6 340 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 C19orf67A6NJJ6 358 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 DDX39AO00148 427 aaKnown RBP11.2□□□□□ -0.62
SYN3-205ENST00000459990 MEIS1O00470 390 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 MAFGO15525 162 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 DHX15O43143 795 aaKnown RBP11.2□□□□□ -0.62
SYN3-205ENST00000459990 ZBTB43O43298 467 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 MBTPS2O43462 519 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 GLP2RO95838 553 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 ITGB1P05556 798 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 RB1P06400 928 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 ADCY7P51828 1080 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 PLPPR4Q7Z2D5 763 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 C11orf84Q9BUA3 381 aaPredicted RBP11.2□□□□□ -0.62
SYN3-205ENST00000459990 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
SYN3-205ENST00000459990 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 PLAGL2Q9UPG8 496 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 HCN4Q9Y3Q4 1203 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 PCDHA2Q9Y5H9 948 aa11.2□□□□□ -0.62
SYN3-205ENST00000459990 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
SYN3-205ENST00000459990 NID2Q14112 1375 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 KLF18A0A0U1RQI7 1052 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 SMIM35A0A1B0GVV1 85 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 PRR33A8MZF0 331 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 STAT5BP51692 787 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 SMAD2Q15796 467 aaKnown RBP11.19□□□□□ -0.62
SYN3-205ENST00000459990 ABHD15Q6UXT9 468 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 NPAS4Q8IUM7 802 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
SYN3-205ENST00000459990 SPPL3Q8TCT6 385 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 PPP1R16BQ96T49 567 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 SDF4Q9BRK5 362 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
SYN3-205ENST00000459990 LMAN2LQ9H0V9 348 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 AZI2Q9H6S1 392 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 ERVK-5Q9HDB9 667 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 RWDD3Q9Y3V2 267 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
SYN3-205ENST00000459990 EDIL3O43854 480 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 SCG2P13521 617 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 KLRC1P26715 233 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 ADD1P35611 737 aaKnown RBP11.18□□□□□ -0.62
SYN3-205ENST00000459990 RBM10P98175 930 aaKnown RBP11.18□□□□□ -0.62
SYN3-205ENST00000459990 PAK2Q13177 524 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 AP3B2Q13367 1082 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 PKN1Q16512 942 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
SYN3-205ENST00000459990 TSGA10IPQ3SY00 556 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 IER5Q5VY09 327 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 JAKMIP3Q5VZ66 844 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
SYN3-205ENST00000459990 ADHFE1Q8IWW8 467 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 KIAA0319LQ8IZA0 1049 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 KLHL23Q8NBE8 558 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 P2RX5Q93086 422 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 MSLNLQ96KJ4 702 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 PLVAPQ9BX97 442 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 CLEC1BQ9P126 229 aa11.18□□□□□ -0.62
SYN3-205ENST00000459990 NOC2LQ9Y3T9 749 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms