RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 THEGQ9P2T0 379 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 CEP131Q9UPN4 1083 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 MTCH2Q9Y6C9 303 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 VCANP13611 3396 aa11.36□□□□□ -0.59
HDLBP-228ENST00000459788 STK36Q9NRP7 1315 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 REV3LO60673 3130 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 CYP3A7-CYP3A51PA0A087WV96 503 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 M0QZ92 97 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 XBP1P17861 261 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 IGFBP4P22692 258 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 CYP3A7P24462 503 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 TCTN1Q2MV58 587 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-228ENST00000459788 PGBD1Q96JS3 809 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 ZNF302Q9NR11 478 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 PCDHA4Q9UN74 947 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 COG5Q9UP83 839 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 RWDD3Q9Y3V2 267 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 PCDHA10Q9Y5I2 948 aa11.35□□□□□ -0.59
HDLBP-228ENST00000459788 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-228ENST00000459788 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 LINC01553A4QN01 128 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 WDR64B1ANS9 1081 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 BACH1O14867 736 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 CCNE2O96020 404 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 CENPBP07199 599 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 PSAPP07602 524 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 CTSHP09668 335 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 MARK3P27448 753 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 SFNP31947 248 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 NLRP5P59047 1200 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 CCT2P78371 535 aaKnown RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 MRPS5P82675 430 aaKnown RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 LPIN1Q14693 890 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 Q4G0T1 1027 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 MTHFD1LQ6UB35 978 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 DNAJB3Q8WWF6 145 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 ARNTL2Q8WYA1 636 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 LENG9Q96B70 501 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 NAP1L4Q99733 375 aaKnown RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 NCOA5Q9HCD5 579 aaKnown RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 TRPV2Q9Y5S1 764 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 SPTBN5Q9NRC6 3674 aaKnown RBP11.34□□□□□ -0.59
HDLBP-228ENST00000459788 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
HDLBP-228ENST00000459788 M0R2N6 131 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 MAGEB2O15479 319 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 LPXNO60711 386 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 PFKFB2O60825 505 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 RB1P06400 928 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 JAK3P52333 1124 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 GRB10Q13322 594 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 PRR16Q569H4 304 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 PDXDC2PQ6P474 469 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.33□□□□□ -0.64e-9■■■□□ 19
HDLBP-228ENST00000459788 CCDC60Q8IWA6 550 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-228ENST00000459788 BLIDQ8IZY5 108 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 WASF1Q92558 559 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 SLC5A5Q92911 643 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 MBOAT7Q96N66 472 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 ASB2Q96Q27 587 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 CELF4Q9BZC1 486 aaKnown RBP11.33□□□□□ -0.6
HDLBP-228ENST00000459788 VPS54Q9P1Q0 977 aa11.33□□□□□ -0.6
HDLBP-228ENST00000459788 FNDC1Q4ZHG4 1894 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-228ENST00000459788 LCHNA4D1U4 455 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 ENPP3O14638 875 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 GHRP10912 638 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 GCFC2P16383 781 aaKnown RBP11.32□□□□□ -0.6
HDLBP-228ENST00000459788 KLRC1P26715 233 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 CDC42EP1Q00587 391 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 PTPROQ16827 1216 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 SWSAP1Q6NVH7 229 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 KRT25Q7Z3Z0 450 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 UPF3BQ9BZI7 483 aaKnown RBP11.32□□□□□ -0.6
HDLBP-228ENST00000459788 SLKQ9H2G2 1235 aaPredicted RBP11.32□□□□□ -0.6
HDLBP-228ENST00000459788 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
HDLBP-228ENST00000459788 NRBP2Q9NSY0 501 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 KIAA1671Q9BY89 1806 aa11.32□□□□□ -0.6
HDLBP-228ENST00000459788 ATG2AQ2TAZ0 1938 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 MYO7AQ13402 2215 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 TCF20Q9UGU0 1960 aaKnown RBP11.31□□□□□ -0.6
HDLBP-228ENST00000459788 EPOPA6NHQ4 379 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 ZBTB42B2RXF5 422 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 C5orf67F2Z3F1 127 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 H3BNC9 293 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 MSH4O15457 936 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 GAS7O60861 476 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 ARHGEF15O94989 841 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
HDLBP-228ENST00000459788 IGBP1P78318 339 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms