RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 EIF3CQ99613 913 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-202ENST00000458649 ELP3Q9H9T3 547 aa11.61□□□□□ -0.55
AMBRA1-202ENST00000458649 LY9Q9HBG7 655 aa11.61□□□□□ -0.55
AMBRA1-202ENST00000458649 DPYSL4O14531 572 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 THAP12O43422 761 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 ATP8B1O43520 1251 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 TFAMQ00059 246 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 EZH2Q15910 746 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 EXOC3L4Q17RC7 722 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 C8orf74Q6P047 294 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 NCAPGQ9BPX3 1015 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 SLC39A2Q9NP94 309 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 RPSAP08865 295 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 CYP2D6P10635 497 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 DPEP1P16444 411 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 FAM186BQ8IYM0 893 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 SIX6OS1Q8N1H7 587 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 TTC39CQ8N584 583 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 PCDHB4Q9Y5E5 795 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 MAPK6Q16659 721 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 CCDC62Q6P9F0 684 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 NDUFAF2Q8N183 169 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 NLRP4Q96MN2 994 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 NLRC4Q9NPP4 1024 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 IRAK4Q9NWZ3 460 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 FAN1Q9Y2M0 1017 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 CAMTA2O94983 1202 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 IRX4P78413 519 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 ITKQ08881 620 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 STOX1Q6ZVD7 989 aa11.6□□□□□ -0.55
AMBRA1-202ENST00000458649 ZNF131P52739 623 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TWF2Q6IBS0 349 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 SGMS1Q86VZ5 419 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ENAHQ8N8S7 591 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 FAM149B1Q96BN6 582 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 GGA3Q9NZ52 723 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ZNF609O15014 1411 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 A0A087WWV3 80 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 OPHN1O60890 802 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ARPP19P56211 112 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TSPY1Q01534 308 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 FAM71BQ8TC56 605 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PIK3R5Q8WYR1 880 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TEX13BQ9BXU2 312 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 SLITRK6Q9H5Y7 841 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PPANQ9NQ55 473 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PCDHA6Q9UN73 950 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PCDHA8Q9Y5H6 950 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 CREB3O43889 395 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 MGEA5O60502 916 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 NR2F2P24468 414 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 HDLBPQ00341 1268 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 LONRF3Q496Y0 759 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 CCDC92Q53HC0 331 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 P3H4Q92791 437 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ZNF512BQ96KM6 892 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PFDN4Q9NQP4 134 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 THEGQ9P2T0 379 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 F5H6K3 240 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 KLRC3Q07444 240 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ABTB1Q969K4 478 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 PGBD1Q96JS3 809 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 RPAP3Q9H6T3 665 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 MAN1B1Q9UKM7 699 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 COPB1P53618 953 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ETF1P62495 437 aaKnown RBP11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 GRAMD1CQ8IYS0 662 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 TMEM47Q9BQJ4 181 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 RAB17Q9H0T7 212 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 ZNF302Q9NR11 478 aa11.59□□□□□ -0.55
AMBRA1-202ENST00000458649 MYO1CO00159 1063 aa11.58□□□□□ -0.56
AMBRA1-202ENST00000458649 PRELPP51888 382 aa11.58□□□□□ -0.56
AMBRA1-202ENST00000458649 FCGRTP55899 365 aa11.58□□□□□ -0.56
AMBRA1-202ENST00000458649 FKBP3Q00688 224 aaKnown RBP11.58□□□□□ -0.56
AMBRA1-202ENST00000458649 PDCD7Q8N8D1 485 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms