RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
SCFD1-203ENST00000458591 NAGPAQ9UK23 515 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 PLAAQ9Y263 795 aa15.49■□□□□ 0.07
SCFD1-203ENST00000458591 FRMD3A2A2Y4 597 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 EML1O00423 815 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 BBOX1O75936 387 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 KIF4AO95239 1232 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 GNA14O95837 355 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 GCFC2P16383 781 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 PAK2Q13177 524 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 COG2Q14746 738 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 GLE1Q53GS7 698 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 GPATCH4Q5T3I0 446 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 SLFN13Q68D06 897 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 ALKBH5Q6P6C2 394 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 MAATS1Q7Z4T9 603 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 NUCKS1Q9H1E3 243 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 BHMT2Q9H2M3 363 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 SIX2Q9NPC8 291 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 ADAMTSL1Q8N6G6 1762 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 EBAG9O00559 213 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 AFPP02771 609 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 HPDP32754 393 aaPredicted RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 JAG1P78504 1218 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 EXOC3L4Q17RC7 722 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 KNOP1Q1ED39 458 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 CEP85LQ5SZL2 805 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 ZC3H3Q8IXZ2 948 aaKnown RBP15.48■□□□□ 0.07
SCFD1-203ENST00000458591 METTL13Q8N6R0 699 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 TAF4BQ92750 862 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 LENG9Q96B70 501 aa15.48■□□□□ 0.07
SCFD1-203ENST00000458591 GFPT2O94808 682 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 COPB2P35606 906 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 SKOR1P84550 965 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 CTTNQ14247 550 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 EPHA7Q15375 998 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 NAA35Q5VZE5 725 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 ADAT2Q7Z6V5 191 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 LRRC57Q8N9N7 239 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 CELF4Q9BZC1 486 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 TMEM59LQ9UK28 342 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 NR2E1Q9Y466 385 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 ASTN1O14525 1302 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 A0A087WUV0 522 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 DDX3XO00571 662 aaKnown RBP eCLIP15.47■□□□□ 0.071e-13■■■■□ 23.8
SCFD1-203ENST00000458591 NDUFAB1O14561 156 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 PPEF1O14829 653 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 GCNT3O95395 438 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 NMT1P30419 496 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 SF3B2Q13435 895 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 UAP1Q16222 522 aaPredicted RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 TADA2BQ86TJ2 420 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 U2AF1L4Q8WU68 220 aaKnown RBP15.47■□□□□ 0.07
SCFD1-203ENST00000458591 OSGEPQ9NPF4 335 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 AMACRQ9UHK6 382 aa15.47■□□□□ 0.07
SCFD1-203ENST00000458591 SHTN1A0MZ66 631 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 BACH1O14867 736 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 MSH4O15457 936 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 CPP00450 1065 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 NR3C1P04150 777 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 XRCC5P13010 732 aaKnown RBP15.46■□□□□ 0.07
SCFD1-203ENST00000458591 UBXN2AP68543 259 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 IKQ13123 557 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-203ENST00000458591 EDRF1Q3B7T1 1238 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 FBXW10Q5XX13 1052 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 ICE2Q659A1 982 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 FOXR2Q6PJQ5 311 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 EPM2AIP1Q7L775 607 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-203ENST00000458591 SH3BP5LQ7L8J4 393 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 SYT2Q8N9I0 419 aaPredicted RBP15.46■□□□□ 0.07
SCFD1-203ENST00000458591 DBNDD1Q9H9R9 158 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 RNF14Q9UBS8 474 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 DNM3Q9UQ16 869 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.07
SCFD1-203ENST00000458591 CHMP2AO43633 222 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 HSD17B3P37058 310 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 USP11P51784 963 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 SPICE1Q8N0Z3 855 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 TPCN2Q8NHX9 752 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.06
SCFD1-203ENST00000458591 SCFD2Q8WU76 684 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 CRYGNQ8WXF5 182 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 SLC35C1Q96A29 364 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 ZC3H12CQ9C0D7 883 aaKnown RBP15.46■□□□□ 0.06
SCFD1-203ENST00000458591 LUC7LQ9NQ29 371 aaKnown RBP15.46■□□□□ 0.06
SCFD1-203ENST00000458591 GCNT4Q9P109 453 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 USP21Q9UK80 565 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.06
SCFD1-203ENST00000458591 SART1O43290 800 aaKnown RBP15.45■□□□□ 0.06
SCFD1-203ENST00000458591 LSP1P33241 339 aa15.45■□□□□ 0.06
SCFD1-203ENST00000458591 CHADLQ6NUI6 762 aa15.45■□□□□ 0.06
SCFD1-203ENST00000458591 FRMD5Q7Z6J6 570 aa15.45■□□□□ 0.06
SCFD1-203ENST00000458591 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
SCFD1-203ENST00000458591 TRIM31Q9BZY9 425 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms