RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 TRPV2Q9Y5S1 764 aa21.38■■□□□ 1.01
COL20A1-204ENST00000455906 IGKV6D-21A0A0A0MT36 114 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 GOLGA8AA7E2F4 631 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 GOLGA8BA8MQT2 603 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 GPR37L1O60883 481 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 AP3B2Q13367 1082 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 C11orf84Q9BUA3 381 aaPredicted RBP21.37■■□□□ 1.01
COL20A1-204ENST00000455906 LMAN2LQ9H0V9 348 aa21.37■■□□□ 1.01
COL20A1-204ENST00000455906 IGSF9BQ9UPX0 1349 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 KLF18A0A0U1RQI7 1052 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 SMIM35A0A1B0GVV1 85 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 CCNE2O96020 404 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 LTBRP36941 435 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 PLA2G5P39877 138 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 BTG3Q14201 252 aaPredicted RBP21.36■■□□□ 1.01
COL20A1-204ENST00000455906 PUS10Q3MIT2 529 aaKnown RBP21.36■■□□□ 1.01
COL20A1-204ENST00000455906 TNPO1Q92973 898 aaKnown RBP21.36■■□□□ 1.01
COL20A1-204ENST00000455906 FTHL17Q9BXU8 183 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 PADI3Q9ULW8 664 aa21.36■■□□□ 1.01
COL20A1-204ENST00000455906 KDM3AQ9Y4C1 1321 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 EVPLQ92817 2033 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 POTEB3A0JP26 581 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 FAM86C2PA6NEL3 165 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 RCAN1P53805 252 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 POTEBQ6S5H4 581 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 MTHFD1LQ6UB35 978 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 ABHD15Q6UXT9 468 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 NIPA1Q7RTP0 329 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 CRYGNQ8WXF5 182 aa21.35■■□□□ 1.01
COL20A1-204ENST00000455906 CELF4Q9BZC1 486 aaKnown RBP21.35■■□□□ 1.01
COL20A1-204ENST00000455906 FAM86B1E9PN63 330 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 DHX15O43143 795 aaKnown RBP21.34■■□□□ 1.01
COL20A1-204ENST00000455906 FAM86B2P0C5J1 330 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 SLC26A2P50443 739 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 KRT32Q14532 448 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 CTC1Q2NKJ3 1217 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 CENPQQ7L2Z9 268 aaPredicted RBP21.34■■□□□ 1.01
COL20A1-204ENST00000455906 NPAS4Q8IUM7 802 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 PLVAPQ9BX97 442 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 TMX1Q9H3N1 280 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 CLDND1Q9NY35 253 aa21.34■■□□□ 1.01
COL20A1-204ENST00000455906 MRPL42Q9Y6G3 142 aaKnown RBP21.34■■□□□ 1.01
COL20A1-204ENST00000455906 TRIOO75962 3097 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 IGLV3-22A0A075B6J6 115 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 M0QZ92 97 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 DDX39AO00148 427 aaKnown RBP21.33■■□□□ 1.01
COL20A1-204ENST00000455906 ADAMTS3O15072 1205 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 MMP1P03956 469 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 ADD1P35611 737 aaKnown RBP21.33■■□□□ 1.01
COL20A1-204ENST00000455906 HYAL1Q12794 435 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 PAK2Q13177 524 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 CAMK1Q14012 370 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 PFKFB3Q16875 520 aaPredicted RBP21.33■■□□□ 1.01
COL20A1-204ENST00000455906 JAKMIP3Q5VZ66 844 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 EP400NLQ6ZTU2 488 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 CCDC60Q8IWA6 550 aaPredicted RBP21.33■■□□□ 1.01
COL20A1-204ENST00000455906 CMTR2Q8IYT2 770 aaKnown RBP21.33■■□□□ 1.01
COL20A1-204ENST00000455906 NME8Q8N427 588 aa21.33■■□□□ 1.01
COL20A1-204ENST00000455906 NCK2O43639 380 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 CDC45O75419 566 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 CPA1P15085 419 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 KLRC1P26715 233 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 SSTR3P32745 418 aaPredicted RBP21.32■■□□□ 1
COL20A1-204ENST00000455906 ZNF76P36508 570 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 KRT76Q01546 638 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 DLX2Q07687 328 aaPredicted RBP21.32■■□□□ 1
COL20A1-204ENST00000455906 PLA2G4DQ86XP0 818 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 ATP8B4Q8TF62 1192 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 P2RX5Q93086 422 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 FAM122AQ96E09 287 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 ALG13Q9NP73 1137 aaKnown RBP21.32■■□□□ 1
COL20A1-204ENST00000455906 PLAGL2Q9UPG8 496 aa21.32■■□□□ 1
COL20A1-204ENST00000455906 MYH9P35579 1960 aaKnown RBP21.32■■□□□ 1
COL20A1-204ENST00000455906 ESYT2A0FGR8 921 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 ZBTB42B2RXF5 422 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 BACH1O14867 736 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 HBP1O60381 514 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 CYP3A4P08684 503 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 HMGB1P09429 215 aaKnown RBP21.31■■□□□ 1
COL20A1-204ENST00000455906 ZP2Q05996 745 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 TMEM266Q2M3C6 531 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 KIAA0319LQ8IZA0 1049 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 KCNB2Q92953 911 aa21.31■■□□□ 1
COL20A1-204ENST00000455906 ARIH1Q9Y4X5 557 aaPredicted RBP21.31■■□□□ 1
COL20A1-204ENST00000455906 WDR81Q562E7 1941 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 IPO5O00410 1097 aaKnown RBP21.3■■□□□ 1
COL20A1-204ENST00000455906 CSPG5O95196 566 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 ITGB1P05556 798 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 SCG2P13521 617 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 ATP4AP20648 1035 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 DNAJB1P25685 340 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 GTF2F1P35269 517 aaKnown RBP eCLIP21.3■■□□□ 1
COL20A1-204ENST00000455906 GATMP50440 423 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 METAP2P50579 478 aaKnown RBP eCLIP21.3■■□□□ 1
COL20A1-204ENST00000455906 APOBRQ0VD83 1088 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 PKN1Q16512 942 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 PAN2Q504Q3 1202 aaKnown RBP21.3■■□□□ 1
COL20A1-204ENST00000455906 FAM160B1Q5W0V3 765 aa21.3■■□□□ 1
COL20A1-204ENST00000455906 TMEM40Q8WWA1 233 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms