RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 KCNA3P22001 575 aa16.57■□□□□ 0.24
LDLR-202ENST00000455727 TDRD12Q587J7 1177 aaKnown RBP16.57■□□□□ 0.24
LDLR-202ENST00000455727 CRACR2AQ9BSW2 395 aa16.57■□□□□ 0.24
LDLR-202ENST00000455727 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
LDLR-202ENST00000455727 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
LDLR-202ENST00000455727 VEZTQ9HBM0 779 aa16.57■□□□□ 0.24
LDLR-202ENST00000455727 GAS7O60861 476 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 MOCS3O95396 460 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 NR3C1P04150 777 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 XRCC5P13010 732 aaKnown RBP16.56■□□□□ 0.24
LDLR-202ENST00000455727 TCP1P17987 556 aaKnown RBP16.56■□□□□ 0.24
LDLR-202ENST00000455727 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
LDLR-202ENST00000455727 DPY19L2P1Q6NXN4 242 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 B3GNT9Q6UX72 402 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 LDHDQ86WU2 507 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 CREG2Q8IUH2 290 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 SEL1LQ9UBV2 794 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 ASTN1O14525 1302 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 GCNT3O95395 438 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 PTGER2P43116 358 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 CAPZA3Q96KX2 299 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 NOX5Q96PH1 765 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
LDLR-202ENST00000455727 AKAP3O75969 853 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 EPB41P11171 864 aaKnown RBP16.55■□□□□ 0.24
LDLR-202ENST00000455727 EPHA7Q15375 998 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 CAGE1Q8TC20 777 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 PIGOQ8TEQ8 1089 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 RIT2Q99578 217 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 BZW2Q9Y6E2 419 aaKnown RBP16.55■□□□□ 0.24
LDLR-202ENST00000455727 UBE4BO95155 1302 aa16.55■□□□□ 0.24
LDLR-202ENST00000455727 GTPBP10A4D1E9 387 aaKnown RBP16.54■□□□□ 0.24
LDLR-202ENST00000455727 PDE2AO00408 941 aaPredicted RBP16.54■□□□□ 0.24
LDLR-202ENST00000455727 FAM13AO94988 1023 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 HSD17B4P51659 736 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ZNF131P52739 623 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 RASSF7Q02833 373 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 GPS2Q13227 327 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 MIGA2Q7L4E1 593 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 PARVGQ9HBI0 331 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 HYOU1Q9Y4L1 999 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ZNF185O15231 689 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ICAM1P05362 532 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 BCRP11274 1271 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 DPEP1P16444 411 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 RAPGEF1Q13905 1077 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ASIC2Q16515 512 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 EXOC3L4Q17RC7 722 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 KLHDC7AQ5VTJ3 777 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 NEK9Q8TD19 979 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 SALL4Q9UJQ4 1053 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 ZHX1Q9UKY1 873 aaPredicted RBP16.54■□□□□ 0.24
LDLR-202ENST00000455727 MYH11P35749 1972 aa16.54■□□□□ 0.24
LDLR-202ENST00000455727 SHTN1A0MZ66 631 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 TGFB1I1O43294 461 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 EIF3JO75822 258 aaKnown RBP16.53■□□□□ 0.24
LDLR-202ENST00000455727 UCHL3P15374 230 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 PON1P27169 355 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 OAS2P29728 719 aaKnown RBP16.53■□□□□ 0.24
LDLR-202ENST00000455727 GHRHRQ02643 423 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 KLHL30Q0D2K2 578 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 NAB2Q15742 525 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 STXBP4Q6ZWJ1 553 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 MMGT1Q8N4V1 131 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 MYCT1Q8N699 235 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 BORCS6Q96GS4 357 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 OSBPL9Q96SU4 736 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 MXRA8Q9BRK3 442 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 TEKT3Q9BXF9 490 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 ARP10275 920 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 ANXA13P27216 316 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 ZYXQ15942 572 aaKnown RBP16.53■□□□□ 0.24
LDLR-202ENST00000455727 MAP9Q49MG5 647 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 ZNF771Q7L3S4 317 aaPredicted RBP16.53■□□□□ 0.24
LDLR-202ENST00000455727 NIPA1Q7RTP0 329 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 IRF2BP2Q7Z5L9 587 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 RUBCNQ92622 972 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 MKNK1Q9BUB5 465 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 UNC45AQ9H3U1 944 aa16.53■□□□□ 0.24
LDLR-202ENST00000455727 BTNL10A8MVZ5 291 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
LDLR-202ENST00000455727 WNT10BO00744 389 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 CHMP2AO43633 222 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 SLC9A1P19634 815 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 APBA1Q02410 837 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 CASP8Q14790 479 aa16.52■□□□□ 0.24
LDLR-202ENST00000455727 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms