RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 WNK4Q96J92 1243 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RIPOR3Q96MK2 946 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RMDN3Q96TC7 470 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 LMAN2LQ9H0V9 348 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 DISC1Q9NRI5 854 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 RTEL1Q9NZ71 1219 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 PIM2Q9P1W9 311 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 IFT80Q9P2H3 777 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 SEL1LQ9UBV2 794 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 CDC23Q9UJX2 597 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 LTBP3Q9NS15 1303 aa5.11□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM86C2PA6NEL3 165 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM170BA6NMN3 283 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 CPLX1O14810 134 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 AREL1O15033 823 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ATE1O95260 518 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 FKBP9O95302 570 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 MED26O95402 600 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 BAG2O95816 211 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 APPP05067 770 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 NAT2P11245 290 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PABPC1P11940 636 aaKnown RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 SPINK2P20155 84 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 XPAP23025 273 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PPM1AP35813 382 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ATP6V1E1P36543 226 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 IL6STP40189 918 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 CLNS1AP54105 237 aaKnown RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ERVK-24P63145 666 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PPP2R2AP63151 447 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 MTA1Q13330 715 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 BLMHQ13867 455 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 KIAA0753Q2KHM9 967 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 TTC31Q49AM3 519 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 SLC10A5Q5PT55 438 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 CFAP58Q5T655 872 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 SCARA3Q6AZY7 606 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ISM2Q6H9L7 571 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 FKBP9P1Q75LS8 142 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PDZD4Q76G19 769 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 GPR155Q7Z3F1 870 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 TTC30AQ86WT1 665 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ERC1Q8IUD2 1116 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 TEX11Q8IYF3 940 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 COLGALT2Q8IYK4 626 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 SMYD4Q8IYR2 804 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZBTB34Q8NCN2 500 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZFPM2Q8WW38 1151 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 USP13Q92995 863 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PPP1R14AQ96A00 147 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 GAL3ST3Q96A11 431 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 CENPTQ96BT3 561 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 LTV1Q96GA3 475 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZSCAN31Q96LW9 406 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 APOL5Q9BWW9 433 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 GOLGA2P5Q9HBQ8 144 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 C1GALT1Q9NS00 363 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 GPRC5BQ9NZH0 403 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 PPARGC1AQ9UBK2 798 aaKnown RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 RABL2BQ9UNT1 228 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 CYP8B1Q9UNU6 501 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 INVSQ9Y283 1065 aa5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 POLR3KQ9Y2Y1 108 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P21-201ENST00000452483 MEIS3P2A8K0S8 358 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZNF891A8MT65 544 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 B4DLN1 442 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 B4E1Z4 1266 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 RNGTTO60942 597 aaKnown RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ULK1O75385 1050 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 DDX58O95786 925 aaKnown RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 FGFR1P11362 822 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ABCB4P21439 1286 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 GRK2P25098 689 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 HOXA10P31260 410 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ADCYAP1R1P41586 468 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 GABREP78334 506 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 HTRA3P83110 453 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ICA1Q05084 483 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 CDK5R2Q13319 367 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 TRIM29Q14134 588 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 PTPN14Q15678 1187 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 CLUL1Q15846 466 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ANO4Q32M45 955 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 SLC6A19Q695T7 634 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZNF765Q7L2R6 523 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 PTRH1Q86Y79 214 aaKnown RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 OR2C3Q8N628 320 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 C7orf31Q8N865 590 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 MSANTD4Q8NCY6 345 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 RNF214Q8ND24 703 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 KLHL6Q8WZ60 621 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 SMARCC1Q92922 1105 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 ISL2Q96A47 359 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 MAGEB10Q96LZ2 347 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 CFAP53Q96M91 514 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 MAP3K14Q99558 947 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 SDF4Q9BRK5 362 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 CHCHD6Q9BRQ6 235 aa5.09□□□□□ -1.59
HMGB3P21-201ENST00000452483 LSM14BQ9BX40 385 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms