RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 PDRG1Q9NUG6 133 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
CHD3-206ENST00000452447 ADAMTS3O15072 1205 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 CCNE2O96020 404 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 ERVK-21P61565 698 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 MRPS6P82932 125 aaKnown RBP14.63□□□□□ -0.07
CHD3-206ENST00000452447 HTRA4P83105 476 aaPredicted RBP14.63□□□□□ -0.07
CHD3-206ENST00000452447 MGAT3Q09327 533 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 ERICH6BQ5W0A0 696 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 KRT40Q6A162 431 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 PDXDC2PQ6P474 469 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 ZBTB10Q96DT7 871 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 ASB2Q96Q27 587 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
CHD3-206ENST00000452447 ZNF302Q9NR11 478 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 PCDHA2Q9Y5H9 948 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 MYO7AQ13402 2215 aa14.63□□□□□ -0.07
CHD3-206ENST00000452447 TTC3P53804 2025 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 IGKV6D-21A0A0A0MT36 114 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.62□□□□□ -0.07
CHD3-206ENST00000452447 DHX15O43143 795 aaKnown RBP14.62□□□□□ -0.07
CHD3-206ENST00000452447 HBP1O60381 514 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 STK3Q13188 491 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 LPIN1Q14693 890 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 FBXO47Q5MNV8 452 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 ZNF746Q6NUN9 644 aaPredicted RBP14.62□□□□□ -0.07
CHD3-206ENST00000452447 SWSAP1Q6NVH7 229 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 CCDC60Q8IWA6 550 aaPredicted RBP14.62□□□□□ -0.07
CHD3-206ENST00000452447 CKAP2LQ8IYA6 745 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 GDPD5Q8WTR4 605 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 TRAPPC12Q8WVT3 735 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
CHD3-206ENST00000452447 TCF20Q9UGU0 1960 aaKnown RBP14.62□□□□□ -0.07
CHD3-206ENST00000452447 SMIM35A0A1B0GVV1 85 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 LPXNO60711 386 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 DEXIO95424 95 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 CIITAP33076 1130 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 KRT76Q01546 638 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 TMEM62Q0P6H9 643 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 SMAP1Q8IYB5 467 aaPredicted RBP14.61□□□□□ -0.07
CHD3-206ENST00000452447 NME8Q8N427 588 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 C22orf23Q9BZE7 217 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 SAMM50Q9Y512 469 aa14.61□□□□□ -0.07
CHD3-206ENST00000452447 COL4A4P53420 1690 aaPredicted RBP14.61□□□□□ -0.07
CHD3-206ENST00000452447 NLRC5Q86WI3 1866 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 PSAPP07602 524 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 KLRC1P26715 233 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 USP11P51784 963 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 AAK1Q2M2I8 961 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 MTHFD1LQ6UB35 978 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 FBXO22Q8NEZ5 403 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
CHD3-206ENST00000452447 SAMD11Q96NU1 681 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 C17orf80Q9BSJ5 609 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 PCDHA10Q9Y5I2 948 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 TRPV2Q9Y5S1 764 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 SQORQ9Y6N5 450 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 ENPP3O14638 875 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 CDKL5O76039 1030 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 CD52P31358 61 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 ZNF484Q5JVG2 852 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 TRMT1LQ7Z2T5 733 aaKnown RBP14.6□□□□□ -0.07
CHD3-206ENST00000452447 IL17RAQ96F46 866 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 FTHL17Q9BXU8 183 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 CELF4Q9BZC1 486 aaKnown RBP14.6□□□□□ -0.07
CHD3-206ENST00000452447 COG5Q9UP83 839 aa14.6□□□□□ -0.07
CHD3-206ENST00000452447 MAFBQ9Y5Q3 323 aaPredicted RBP14.6□□□□□ -0.07
CHD3-206ENST00000452447 COL1A2P08123 1366 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 EPC2Q52LR7 807 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 BLIDQ8IZY5 108 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 TBCKQ8TEA7 893 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 BBXQ8WY36 941 aaPredicted RBP14.59□□□□□ -0.07
CHD3-206ENST00000452447 LENG9Q96B70 501 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
CHD3-206ENST00000452447 AGO3Q9H9G7 860 aaKnown RBP14.59□□□□□ -0.07
CHD3-206ENST00000452447 GINS2Q9Y248 185 aa14.59□□□□□ -0.07
CHD3-206ENST00000452447 IGSF9BQ9UPX0 1349 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 BDP1A6H8Y1 2624 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 MSH4O15457 936 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 ANAPC15P60006 121 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 TFF2Q03403 129 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 PAK2Q13177 524 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 GALNT17Q6IS24 598 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 FAM177A1Q8N128 213 aaPredicted RBP14.58□□□□□ -0.08
CHD3-206ENST00000452447 FIBCD1Q8N539 461 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 GABBR1Q9UBS5 961 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 PADI3Q9ULW8 664 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 CEP131Q9UPN4 1083 aa14.58□□□□□ -0.08
CHD3-206ENST00000452447 KDM3AQ9Y4C1 1321 aa14.57□□□□□ -0.08
CHD3-206ENST00000452447 EIF5BO60841 1220 aaKnown RBP14.57□□□□□ -0.08
CHD3-206ENST00000452447 GAS7O60861 476 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms