RNA–Protein interactions for RNA: ENST00000452337.5

EFEMP1-210, Transcript of EGF containing fibulin extracellular matrix protein 1, human

TSL 3

Gene EFEMP1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFEMP1-210	ENST00000452337	ZNF438	Q7Z4V0	828 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	SPRED2	Q7Z698	418 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	RNF180	Q86T96	592 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	TTC6	Q86TZ1	520 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	METTL16	Q86W50	562 aa	Known RBP	4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	ATCAY	Q86WG3	371 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	MAPKAPK5	Q8IW41	473 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	CEP120	Q8N960	986 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	MYLIP	Q8WY64	445 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	EDEM1	Q92611	657 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	BAD	Q92934	168 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	RNPC3	Q96LT9	517 aa	Known RBP	4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	USP26	Q9BXU7	913 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	PORCN	Q9H237	461 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	SAP30BP	Q9UHR5	308 aa	Known RBP	4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	SERPINB13	Q9UIV8	391 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	PALD1	Q9ULE6	856 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	ZBTB21	Q9ULJ3	1066 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	NOB1	Q9ULX3	412 aa	Known RBP	4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	PA2G4	Q9UQ80	394 aa	Known RBP	4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	TACC3	Q9Y6A5	838 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	FLT1	P17948	1338 aa		4.09	□□□□□ -1.75
EFEMP1-210	ENST00000452337	NCOR1	O75376	2440 aa		4.09	□□□□□ -1.76
EFEMP1-210	ENST00000452337	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	DCDC2C	A8MYV0	355 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MPHOSPH10	O00566	681 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	POLR3D	P05423	398 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CLTB	P09497	229 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PTPRF	P10586	1907 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	RARB	P10826	455 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	FCER1A	P12319	257 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	DRD2	P14416	443 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	VCAM1	P19320	739 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CYP7A1	P22680	504 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MAPK1	P28482	360 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ADORA2A	P29274	412 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ADCYAP1R1	P41586	468 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MFAP1	P55081	439 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	FPGS	Q05932	587 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PLS1	Q14651	629 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	RRP1B	Q14684	758 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TRIM60	Q495X7	471 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	EXOSC6	Q5RKV6	272 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PDE12	Q6L8Q7	609 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	LBX2	Q6XYB7	198 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ABRA	Q8N0Z2	381 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MB21D1	Q8N884	522 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	NUP133	Q8WUM0	1156 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	FERMT2	Q96AC1	680 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	C12orf42	Q96LP6	360 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	KRTAP9-8	Q9BYQ0	159 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TANGO6	Q9C0B7	1094 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	KIAA1683	Q9H0B3	1180 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CDH23	Q9H251	3354 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MROH8	Q9H579	483 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SH2D4A	Q9H788	454 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TMEM39A	Q9NV64	488 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ABI2	Q9NYB9	513 aa	Predicted RBP	4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	NRBP1	Q9UHY1	535 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	BRPF3	Q9ULD4	1205 aa		4.08	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ALPK3	Q96L96	1907 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PHIP	Q8WWQ0	1821 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	LOC285556	D6RIA3	1793 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	LOC100289279	A0A1B0GTE1	492 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TRIM43B	A6NCK2	446 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	KIAA0355	O15063	1070 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	NDUFB5	O43674	189 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PEX10	O60683	326 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PQBP1	O60828	265 aa	Known RBP	4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CNMD	O75829	334 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	IDH1	O75874	414 aa	Known RBP	4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SLC25A27	O95847	323 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CYBA	P13498	195 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	NPR3	P17342	541 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ERCC3	P19447	782 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MZF1	P28698	734 aa	Predicted RBP	4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	COPB2	P35606	906 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MCAM	P43121	646 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MRPS5	P82675	430 aa	Known RBP	4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	ARHGAP4	P98171	946 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TLE2	Q04725	743 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SOX4	Q06945	474 aa	Predicted RBP	4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SLFN5	Q08AF3	891 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MAP3K12	Q12852	859 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MTX1	Q13505	466 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	KCTD2	Q14681	263 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SNX17	Q15036	470 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	LRRC41	Q15345	812 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	MLANA	Q16655	118 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	C8orf34	Q49A92	452 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	C9orf50	Q5SZB4	431 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	TATDN1	Q6P1N9	297 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	PI16	Q6UXB8	463 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	CCDC129	Q6ZRS4	1044 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	LRRN4CL	Q8ND94	238 aa		4.07	□□□□□ -1.76
EFEMP1-210	ENST00000452337	SHCBP1	Q8NEM2	672 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms