RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MCMDC2Q4G0Z9 681 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SGO2Q562F6 1265 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BEND3Q5T5X7 828 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NCCRP1Q6ZVX7 275 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ALDH16A1Q8IZ83 802 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 DQX1Q8TE96 717 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 STK32AQ8WU08 396 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 S100ZQ8WXG8 99 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 HPS1Q92902 700 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MTRQ99707 1265 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ETNK1Q9HBU6 452 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RXFP1Q9HBX9 757 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PCDH18Q9HCL0 1135 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EPB41L5Q9HCM4 733 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CYP39A1Q9NYL5 469 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 STAP2Q9UGK3 403 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ORC6Q9Y5N6 252 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NUP153P49790 1475 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 A0A1W2PQC6 194 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SNTNA6NMZ2 147 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 IGF2BP3O00425 579 aaKnown RBP eCLIP2.37□□□□□ -2.03
USP53-202ENST00000450251 GNB5O14775 395 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 STX7O15400 261 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ZBED4O75132 1171 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ALOX15P16050 662 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 PFKFB1P16118 471 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CTNNA2P26232 953 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZBED6P86452 979 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 DIXDC1Q155Q3 683 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PARP6Q2NL67 630 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 LETM2Q2VYF4 491 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 E4F1Q66K89 784 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 LRRC8BQ6P9F7 803 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BTNL9Q6UXG8 535 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 MARK2Q7KZI7 788 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 GET4Q7L5D6 327 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 GSTA5Q7RTV2 222 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TTC6Q86TZ1 520 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PDZD8Q8NEN9 1154 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 QKIQ96PU8 341 aaKnown RBP eCLIP2.37□□□□□ -2.03
USP53-202ENST00000450251 USP28Q96RU2 1077 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NDNQ99608 321 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ELAC2Q9BQ52 826 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 C1orf50Q9BV19 199 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PITPNM3Q9BZ71 974 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 UPF3AQ9H1J1 476 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 MRPL46Q9H2W6 279 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 SLC39A2Q9NP94 309 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 UBN1Q9NPG3 1134 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SLC52A1Q9NWF4 448 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 WDR35Q9P2L0 1181 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ATP6V1HQ9UI12 483 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 BLOC1S6Q9UL45 172 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TNKSO95271 1327 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SYNGAP1Q96PV0 1343 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SLIT1O75093 1534 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EFCAB6Q5THR3 1501 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KDM6AO15550 1401 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 DCCP43146 1447 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 CPSF1Q10570 1443 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 H3BQF6 201 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZNF213O14771 459 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 HNRNPRO43390 633 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 GTPBP6O43824 516 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 SNAPC5O75971 98 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 PDHBP11177 359 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EEF2P13639 858 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 KRT15P19012 456 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RPL13P26373 211 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 ADSLP30566 484 aaPredicted RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 INPP1P49441 399 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 COPB1P53618 953 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 DAB2P98082 770 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 HDLBPQ00341 1268 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 TBC1D8BQ0IIM8 1120 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TEFQ10587 303 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KIF22Q14807 665 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SUZ12Q15022 739 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 MMEL1Q495T6 779 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 C6orf10Q5SRN2 563 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 KCTD16Q68DU8 428 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 FAAH2Q6GMR7 532 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TRMT10CQ7L0Y3 403 aaKnown RBP2.37□□□□□ -2.03
USP53-202ENST00000450251 GPR141Q7Z602 305 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 LONP2Q86WA8 852 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RASSF3Q86WH2 238 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.37□□□□□ -2.03
USP53-202ENST00000450251 RNF169Q8NCN4 708 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TTLL11Q8NHH1 800 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 NELFBQ8WX92 580 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TUBGCP3Q96CW5 907 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TMEM87BQ96K49 555 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 HAUS7Q99871 368 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 RHOBTB2Q9BYZ6 727 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EDEM3Q9BZQ6 932 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 EPS8L2Q9H6S3 715 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 ZNF287Q9HBT7 754 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 TMBIM4Q9HC24 238 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 OLFML3Q9NRN5 406 aa2.37□□□□□ -2.03
USP53-202ENST00000450251 GIN1Q9NXP7 522 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms