RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 CCDC60Q8IWA6 550 aaPredicted RBP17.31■□□□□ 0.36
CHD3-205ENST00000449744 SMAP1Q8IYB5 467 aaPredicted RBP17.31■□□□□ 0.36
CHD3-205ENST00000449744 ATP8B4Q8TF62 1192 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 TRAPPC12Q8WVT3 735 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 TGS1Q96RS0 853 aaKnown RBP17.31■□□□□ 0.36
CHD3-205ENST00000449744 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 PRDM6Q9NQX0 595 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 SAMM50Q9Y512 469 aa17.31■□□□□ 0.36
CHD3-205ENST00000449744 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 SCRN1Q12765 414 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 GRB10Q13322 594 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 LPIN1Q14693 890 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 FBXO47Q5MNV8 452 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 GALNT17Q6IS24 598 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 MTHFD1LQ6UB35 978 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 FAM177A1Q8N128 213 aaPredicted RBP17.3■□□□□ 0.36
CHD3-205ENST00000449744 TBCKQ8TEA7 893 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 TOP1MTQ969P6 601 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 THEGQ9P2T0 379 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 MTUS1Q9ULD2 1270 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 PCDHA10Q9Y5I2 948 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 MTCH2Q9Y6C9 303 aa17.3■□□□□ 0.36
CHD3-205ENST00000449744 COL1A2P08123 1366 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.29■□□□□ 0.36
CHD3-205ENST00000449744 XBP1P17861 261 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 POU3F3P20264 500 aaPredicted RBP17.29■□□□□ 0.36
CHD3-205ENST00000449744 KLRC1P26715 233 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 ERVK-21P61565 698 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 HTRA4P83105 476 aaPredicted RBP17.29■□□□□ 0.36
CHD3-205ENST00000449744 TMEM62Q0P6H9 643 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 SKIV2LQ15477 1246 aaKnown RBP17.29■□□□□ 0.36
CHD3-205ENST00000449744 ZNF484Q5JVG2 852 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 TSHZ1Q6ZSZ6 1077 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 SPRED2Q7Z698 418 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 NME8Q8N427 588 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
CHD3-205ENST00000449744 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 MSH4O15457 936 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 PFKFB2O60825 505 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 GAS7O60861 476 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 AK2P54819 239 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 TJAP1Q5JTD0 557 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 TRMT1LQ7Z2T5 733 aaKnown RBP17.28■□□□□ 0.36
CHD3-205ENST00000449744 ATXN2LQ8WWM7 1075 aaKnown RBP17.28■□□□□ 0.36
CHD3-205ENST00000449744 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
CHD3-205ENST00000449744 LENG9Q96B70 501 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 AIFM3Q96NN9 605 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
CHD3-205ENST00000449744 GABBR1Q9UBS5 961 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
CHD3-205ENST00000449744 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
CHD3-205ENST00000449744 STK36Q9NRP7 1315 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 CD52P31358 61 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHD3-205ENST00000449744 LRCH2Q5VUJ6 765 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 SP7Q8TDD2 431 aaPredicted RBP17.27■□□□□ 0.36
CHD3-205ENST00000449744 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 SAMD11Q96NU1 681 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 RIT2Q99578 217 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 SUGCTQ9HAC7 445 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 DISC1Q9NRI5 854 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 GINS2Q9Y248 185 aa17.27■□□□□ 0.36
CHD3-205ENST00000449744 PRUNE2Q8WUY3 3088 aa17.27■□□□□ 0.35
CHD3-205ENST00000449744 TTC28Q96AY4 2481 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 ENPP3O14638 875 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 CHMP2AO43633 222 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 ATP4AP20648 1035 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 SFNP31947 248 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 JAK3P52333 1124 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 Q4G0T1 1027 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 KRT40Q6A162 431 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 IL27Q8NEV9 243 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 WASF1Q92558 559 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 SLC5A5Q92911 643 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 IL17RAQ96F46 866 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 FAM167AQ96KS9 214 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 C17orf80Q9BSJ5 609 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 FTHL17Q9BXU8 183 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
CHD3-205ENST00000449744 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 SIP14410 1827 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 EYSQ5T1H1 3165 aa17.26■□□□□ 0.35
CHD3-205ENST00000449744 IGSF9BQ9UPX0 1349 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 M0R2N6 131 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 EDIL3O43854 480 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 LPXNO60711 386 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 TDP2O95551 362 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
CHD3-205ENST00000449744 PAK2Q13177 524 aa17.25■□□□□ 0.35
CHD3-205ENST00000449744 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms