RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 CAPN11Q9UMQ6 739 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 COL4A3BPQ9Y5P4 624 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 PHLPP2Q6ZVD8 1323 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ATRNL1Q5VV63 1379 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CTAGE9A4FU28 777 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZSCAN5CA6NGD5 496 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 N4BP1O75113 896 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 SMARCA1P28370 1054 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 USP8P40818 1118 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CHMP4BP1P59074 171 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 MAP3K9P80192 1104 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 HDLBPQ00341 1268 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CNTN2Q02246 1040 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 EHHADHQ08426 723 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 MAN2A1Q16706 1144 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ODR4Q5SWX8 454 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 SNRNP48Q6IEG0 339 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZNF746Q6NUN9 644 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CYFIP1Q7L576 1253 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ADAT2Q7Z6V5 191 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 TMTC1Q8IUR5 882 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 GUF1Q8N442 669 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 NEK11Q8NG66 645 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CAGE1Q8TC20 777 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZNF526Q8TF50 670 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 HDAC7Q8WUI4 952 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 KAT5Q92993 513 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 SAAL1Q96ER3 474 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 TSG101Q99816 390 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 PAGR1Q9BTK6 254 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 IFIH1Q9BYX4 1025 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 KCTD10Q9H3F6 313 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 TOPORSQ9NS56 1045 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 HERC5Q9UII4 1024 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ASTN1O14525 1302 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 A0A087X0T9 212 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ESYT3A0FGR9 886 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 SLC16A4O15374 487 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 HIP1RO75146 1068 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 GFPT2O94808 682 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 NR3C1P04150 777 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 FAM228BP0C875 321 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 HARSP12081 509 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 USP11P51784 963 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 VSNL1P62760 191 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZCWPW2Q504Y3 356 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 C2CD6Q53TS8 623 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 MIER3Q7Z3K6 550 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZNF397Q8NF99 534 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CLEC4DQ8WXI8 215 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 BAP1Q92560 729 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CCDC127Q96BQ5 260 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CLMNQ96JQ2 1002 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 TRERF1Q96PN7 1200 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 PSMD1Q99460 953 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 DNAJC7Q99615 494 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 NAPGQ99747 312 aaPredicted RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 PYM1Q9BRP8 204 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 CBWD1Q9BRT8 395 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 RABEP2Q9H5N1 569 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZNF408Q9H9D4 720 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 ZNHIT6Q9NWK9 470 aaKnown RBP4.6□□□□□ -1.67
LMBR1-212ENST00000448926 MYH11P35749 1972 aa4.6□□□□□ -1.67
LMBR1-212ENST00000448926 K7ENM7 598 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 BACH1O14867 736 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 TGFB1I1O43294 461 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 PSMD10O75832 226 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CCNE2O96020 404 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 ABCB4P21439 1286 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 RPA1P27694 616 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 FKBP3Q00688 224 aaKnown RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CBWD6Q4V339 395 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 EPC2Q52LR7 807 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CBWD3Q5JTY5 395 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CBWD5Q5RIA9 395 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 TREML2Q5T2D2 321 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 FAM102BQ5T8I3 360 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 PALB2Q86YC2 1186 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CPNE8Q86YQ8 564 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 SYCP3Q8IZU3 236 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 RBM46Q8TBY0 533 aaKnown RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 SYTL5Q8TDW5 730 aaPredicted RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 RIN2Q8WYP3 895 aaPredicted RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 RMDN3Q96TC7 470 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 RANBP17Q9H2T7 1088 aaKnown RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 HAUS4Q9H6D7 363 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 ANKZF1Q9H8Y5 726 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 PGAP2Q9UHJ9 254 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 PCDHA13Q9Y5I0 950 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 FER1L6Q2WGJ9 1857 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CYP3A7-CYP3A51PA0A087WV96 503 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 PVALEFA0A1B0GWK0 134 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 ARHGEF35A5YM69 484 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 CCDC169A6NNP5 214 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 hCG_1984214I3L0E3 225 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 ASNSP08243 561 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 MYBL2P10244 700 aa4.59□□□□□ -1.67
LMBR1-212ENST00000448926 GCFC2P16383 781 aaKnown RBP4.59□□□□□ -1.67
LMBR1-212ENST00000448926 COPB2P35606 906 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms