RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ASMTLO95671 621 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 RPS17P08708 135 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 SERPINB6P35237 376 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 SLC9C1Q4G0N8 1177 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 LGSNQ5TDP6 509 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 NDUFAF5Q5TEU4 345 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 TWF2Q6IBS0 349 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 AAGABQ6PD74 315 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 KAT2BQ92831 832 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 FAM149B1Q96BN6 582 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 COX4I2Q96KJ9 171 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ETNK1Q9HBU6 452 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ARHGEF10LQ9HCE6 1279 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ZRANB1Q9UGI0 708 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 LIMA1Q9UHB6 759 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 SMG5Q9UPR3 1016 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 MROH7Q68CQ1 1323 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ZFYVE9O95405 1425 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 CLRN2A0PK11 232 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 TNFAIP8O95379 198 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 HSPA1AP0DMV8 641 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 HSPA1BP0DMV9 641 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 AFMP43652 599 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ST13P50502 369 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 CDK7P50613 346 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 DEFA1P59665 94 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 DEFA3P59666 94 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ZBED6P86452 979 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ERICH1Q86X53 443 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 TBC1D5Q92609 795 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 POP5Q969H6 163 aaKnown RBP3.14□□□□□ -1.91
CHD9-203ENST00000447540 THAP11Q96EK4 314 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 MED30Q96HR3 178 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 SENP7Q9BQF6 1050 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 CNPY3Q9BT09 278 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 AS3MTQ9HBK9 375 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 ANLNQ9NQW6 1124 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 MCM9Q9NXL9 1143 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 CCPG1Q9ULG6 757 aa3.14□□□□□ -1.91
CHD9-203ENST00000447540 MROH2AA6NES4 1674 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ADGBQ8N7X0 1667 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 VWA3AA6NCI4 1184 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 UBTFL1P0CB47 393 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 KRT15P19012 456 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 HPDP32754 393 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 TBL3Q12788 808 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 C5orf22Q49AR2 442 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 HABP4Q5JVS0 413 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 DEPDC1Q5TB30 811 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TMEM126BQ8IUX1 230 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZNF579Q8NAF0 562 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 PLEKHO2Q8TD55 490 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NLRP7Q8WX94 980 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TNIP3Q96KP6 325 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SLC39A3Q9BRY0 314 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 PUS3Q9BZE2 481 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZNF304Q9HCX3 659 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 STX18Q9P2W9 335 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 TBK1Q9UHD2 729 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 IPPQ9Y573 584 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TNKSO95271 1327 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 POTECB2RU33 542 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NTRK1P04629 796 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 HSPA1LP34931 641 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 PRIM2P49643 509 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ZNF132P52740 706 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 FOXD4Q12950 439 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 LSAMPQ13449 338 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TRIM16LQ309B1 348 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 XKRXQ6PP77 449 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ADCK1Q86TW2 530 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 NCSTNQ92542 709 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 QKIQ96PU8 341 aaKnown RBP eCLIP3.13□□□□□ -1.913e-7■■■■□ 26.4
CHD9-203ENST00000447540 COQ7Q99807 217 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 RBM42Q9BTD8 480 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 ECHDC1Q9NTX5 307 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 TMEM9Q9P0T7 183 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GAKO14976 1311 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KMOO15229 486 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 KLHL41O60662 606 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 MYCP01106 439 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 KIF22Q14807 665 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CCDC58Q4VC31 144 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CEP85Q6P2H3 762 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ACAD11Q709F0 780 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 COL23A1Q86Y22 540 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 SPARTQ8N0X7 666 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ST13P5Q8NFI4 369 aaPredicted RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 BEST2Q8NFU1 509 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CCT6BQ92526 530 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 FMO2Q99518 471 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 RAB34Q9BZG1 259 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 RETREG1Q9H6L5 497 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 EPS8L2Q9H6S3 715 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 SENP2Q9HC62 589 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 GUCA1BQ9UMX6 200 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 ABCB11O95342 1321 aa3.13□□□□□ -1.91
CHD9-203ENST00000447540 CPSF1Q10570 1443 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 YTHDC2Q9H6S0 1430 aaKnown RBP3.13□□□□□ -1.91
CHD9-203ENST00000447540 TRIM64CA6NLI5 447 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms