RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 PUM1Q14671 1186 aaKnown RBP eCLIP6.33□□□□□ -1.4
LINC00440-201ENST00000446579 LRRC41Q15345 812 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 TMEM177Q53S58 311 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
LINC00440-201ENST00000446579 FKBP9P1Q75LS8 142 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 OVCH1Q7RTY7 1134 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 B3GNT8Q7Z7M8 397 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 NXPE1Q8N323 547 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 COG1Q8WTW3 980 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 CABP5Q9NP86 173 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
LINC00440-201ENST00000446579 PRKD3O94806 890 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 FBXO21O94952 628 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 PYGMP11217 842 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 OCRLQ01968 901 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 CACNB2Q08289 660 aaPredicted RBP6.32□□□□□ -1.4
LINC00440-201ENST00000446579 FAPQ12884 760 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 ZNF827Q17R98 1081 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 SAPCD2Q86UD0 394 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 PASD1Q8IV76 773 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 CCDC146Q8IYE0 955 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 RTFDC1Q9BY42 306 aaPredicted RBP6.32□□□□□ -1.4
LINC00440-201ENST00000446579 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 PCDH18Q9HCL0 1135 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 CLDND1Q9NY35 253 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 COQ6Q9Y2Z9 468 aa6.32□□□□□ -1.4
LINC00440-201ENST00000446579 TNKSO95271 1327 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 GSTA4O15217 222 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 GAS7O60861 476 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ULK1O75385 1050 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 SOD2P04179 222 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ATP2A2P16615 1042 aaKnown RBP6.31□□□□□ -1.4
LINC00440-201ENST00000446579 GNALP38405 381 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 IL2P60568 153 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ERVK-21P61565 698 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ZFYVE27Q5T4F4 411 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 NXNQ6DKJ4 435 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ETV3LQ6ZN32 361 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 C16orf59Q7L2K0 433 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 OTOP1Q7RTM1 612 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 MILR1Q7Z6M3 343 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ZBTB46Q86UZ6 589 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 CCAR1Q8IX12 1150 aaKnown RBP6.31□□□□□ -1.4
LINC00440-201ENST00000446579 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
LINC00440-201ENST00000446579 FBXW5Q969U6 566 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 HOOK2Q96ED9 719 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 SMAD5Q99717 465 aaKnown RBP6.31□□□□□ -1.4
LINC00440-201ENST00000446579 YIPF4Q9BSR8 244 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 EMC7Q9NPA0 242 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ZIM2Q9NZV7 527 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ZKSCAN5Q9Y2L8 839 aa6.31□□□□□ -1.4
LINC00440-201ENST00000446579 ARID4BQ4LE39 1312 aaPredicted RBP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 CCDC66A2RUB6 948 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 FAM47E-STBD1D6RA91 191 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 HGSO14964 777 aaPredicted RBP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 RFPL1O75677 317 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 DGKIO75912 1065 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 ABLIM3O94929 683 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 GRK2P25098 689 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 CNR2P34972 360 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 GRK3P35626 688 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 GJA9P57773 515 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 HTRA3P83110 453 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 LACTBP83111 547 aaPredicted RBP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 HLTFQ14527 1009 aaKnown RBP eCLIP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 ARHGAP44Q17R89 818 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 ATP13A4Q4VNC1 1196 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 FAM47CQ5HY64 1035 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 MIB1Q86YT6 1006 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 TCEAL8Q8IYN2 117 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 SMARCC2Q8TAQ2 1214 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 SLC13A1Q9BZW2 595 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 NGRNQ9NPE2 291 aaKnown RBP6.3□□□□□ -1.4
LINC00440-201ENST00000446579 ZNF652Q9Y2D9 606 aa6.3□□□□□ -1.4
LINC00440-201ENST00000446579 SH3D21A4FU49 640 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 SRGAP2CP0DJJ0 459 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 CYP2C8P10632 490 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 EMC4Q5J8M3 183 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 STEAP3Q658P3 488 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 IQSEC1Q6DN90 963 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 ZC3H18Q86VM9 953 aaKnown RBP6.29□□□□□ -1.4
LINC00440-201ENST00000446579 CARFQ8N187 725 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 MYO1HQ8N1T3 1032 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 CHTF18Q8WVB6 975 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 DDX11Q96FC9 970 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 SCYL1Q96KG9 808 aa6.29□□□□□ -1.4
LINC00440-201ENST00000446579 GPR101Q96P66 508 aaPredicted RBP6.29□□□□□ -1.4
LINC00440-201ENST00000446579 TCF7L1Q9HCS4 588 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms