RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ADAMTS3O15072 1205 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 CDC45O75419 566 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 CCNE2O96020 404 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 RPLP2P05387 115 aaKnown RBP17.59■□□□□ 0.41
SEC13-213ENST00000445064 KLRC1P26715 233 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 FGD1P98174 961 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 AP3B2Q13367 1082 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 MTHFD1LQ6UB35 978 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 ABHD15Q6UXT9 468 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 PLA2G4DQ86XP0 818 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 TEX2Q8IWB9 1127 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 GJD3Q8N144 294 aa17.59■□□□□ 0.41
SEC13-213ENST00000445064 PABPC5Q96DU9 382 aaKnown RBP17.59■□□□□ 0.41
SEC13-213ENST00000445064 RALGAPA2Q2PPJ7 1873 aa17.58■□□□□ 0.41
SEC13-213ENST00000445064 BDP1A6H8Y1 2624 aa17.58■□□□□ 0.41
SEC13-213ENST00000445064 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 FAM86B1E9PN63 330 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 BACH1O14867 736 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 CSPG5O95196 566 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 HMGB1P09429 215 aaKnown RBP17.58■□□□□ 0.4
SEC13-213ENST00000445064 FAM86B2P0C5J1 330 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 KRT76Q01546 638 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.4
SEC13-213ENST00000445064 Q6ZUG5 572 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 CRIPAKQ8N1N5 446 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 NME8Q8N427 588 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 CLP1Q92989 425 aaKnown RBP17.58■□□□□ 0.4
SEC13-213ENST00000445064 C11orf84Q9BUA3 381 aaPredicted RBP17.58■□□□□ 0.4
SEC13-213ENST00000445064 FTHL17Q9BXU8 183 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 CDHR5Q9HBB8 845 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 ALG13Q9NP73 1137 aaKnown RBP17.58■□□□□ 0.4
SEC13-213ENST00000445064 CLDND1Q9NY35 253 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 RWDD3Q9Y3V2 267 aa17.58■□□□□ 0.4
SEC13-213ENST00000445064 IGSF9BQ9UPX0 1349 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 PI4K2BG5E9Z4 385 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 DHX15O43143 795 aaKnown RBP17.57■□□□□ 0.4
SEC13-213ENST00000445064 HBP1O60381 514 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 SCG2P13521 617 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 SSTR3P32745 418 aaPredicted RBP17.57■□□□□ 0.4
SEC13-213ENST00000445064 SLC26A2P50443 739 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 METAP2P50579 478 aaKnown RBP eCLIP17.57■□□□□ 0.4
SEC13-213ENST00000445064 TMEM266Q2M3C6 531 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 PUS10Q3MIT2 529 aaKnown RBP17.57■□□□□ 0.4
SEC13-213ENST00000445064 TMEM31Q5JXX7 168 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 SWSAP1Q6NVH7 229 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 NIPA1Q7RTP0 329 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 CCDC60Q8IWA6 550 aaPredicted RBP17.57■□□□□ 0.4
SEC13-213ENST00000445064 LMAN2LQ9H0V9 348 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 GINS2Q9Y248 185 aa17.57■□□□□ 0.4
SEC13-213ENST00000445064 TTC3P53804 2025 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 IGLV3-22A0A075B6J6 115 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 FAM86C2PA6NEL3 165 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 CYP3A4P08684 503 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 ATP4AP20648 1035 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 IBSPP21815 317 aaPredicted RBP17.56■□□□□ 0.4
SEC13-213ENST00000445064 LTBRP36941 435 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 RCAN1P53805 252 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 HYAL1Q12794 435 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
SEC13-213ENST00000445064 PAK2Q13177 524 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 COL19A1Q14993 1142 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 PAN2Q504Q3 1202 aaKnown RBP17.56■□□□□ 0.4
SEC13-213ENST00000445064 FAM160B1Q5W0V3 765 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 PDXDC2PQ6P474 469 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 CRYGNQ8WXF5 182 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 BRF1Q92994 677 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 JAKMIP1Q96N16 626 aaKnown RBP17.56■□□□□ 0.4
SEC13-213ENST00000445064 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 IGFLR1Q9H665 355 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 C11orf16Q9NQ32 467 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 ZNF302Q9NR11 478 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 PLAGL2Q9UPG8 496 aa17.56■□□□□ 0.4
SEC13-213ENST00000445064 MRPL42Q9Y6G3 142 aaKnown RBP17.56■□□□□ 0.4
SEC13-213ENST00000445064 LOXHD1Q8IVV2 1947 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 KDM3AQ9Y4C1 1321 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 IPO5O00410 1097 aaKnown RBP17.55■□□□□ 0.4
SEC13-213ENST00000445064 GPR37L1O60883 481 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 STAG3L1P0CL83 205 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 GTF2F1P35269 517 aaKnown RBP eCLIP17.55■□□□□ 0.4
SEC13-213ENST00000445064 GATMP50440 423 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 PKN1Q16512 942 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 MIS18BP1Q6P0N0 1132 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
SEC13-213ENST00000445064 CMTR2Q8IYT2 770 aaKnown RBP17.55■□□□□ 0.4
SEC13-213ENST00000445064 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 ATP8B4Q8TF62 1192 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 KCNB2Q92953 911 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 ZNF577Q9BSK1 485 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 PLVAPQ9BX97 442 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 ZMYND12Q9H0C1 365 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 C6orf50Q9HD87 102 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 NOC2LQ9Y3T9 749 aaKnown RBP17.55■□□□□ 0.4
SEC13-213ENST00000445064 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
SEC13-213ENST00000445064 NCOR1O75376 2440 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms